Author: pkluegl Date: Tue Jun 4 16:59:07 2013 New Revision: 1489514 URL: http://svn.apache.org/r1489514 Log: UIMA-2859 - added some simple impl for reading/writing constraints
Added: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportConstraintsHandler.java - copied, changed from r1489049, uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportAllConstraintsHandler.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintContentHandler.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLUtils.java - copied, changed from r1489049, uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLExporter.java Removed: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportAllConstraintsHandler.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLExporter.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLImporter.java Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/plugin.xml uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaConstraint.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaRuleConstraint.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaConstraintFactory.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaGEConstraint.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaRuleListConstraint.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/SimpleRutaRuleConstraint.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintDialog.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectComposite.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectTableLabelProvider.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/DocumentViewRunHandler.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ImportConstraintsHandler.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/CDEComparatorFactory.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintData.java uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/EvaluationMeasures.java Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/plugin.xml URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/plugin.xml?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/plugin.xml (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/plugin.xml Tue Jun 4 16:59:07 2013 @@ -703,7 +703,7 @@ under the License. name="RunFromDocumentView"> </command> <command - defaultHandler="org.apache.uima.ruta.cde.ui.ExportAllConstraintsHandler" + defaultHandler="org.apache.uima.ruta.cde.ui.ExportConstraintsHandler" id="toolbar:org.apache.uima.ruta.cde.ui.ConstraintSelectView.exportall" name="ExportAllConstraints"> </command> Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaConstraint.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaConstraint.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaConstraint.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaConstraint.java Tue Jun 4 16:59:07 2013 @@ -23,8 +23,14 @@ import org.apache.uima.cas.CAS; public interface IRutaConstraint { - public Double processConstraint (CAS input) throws Exception; - - public String getDescription (); - + Double processConstraint(CAS input) throws Exception; + + String getDescription(); + + void setDescription(String description); + + String getData(); + + void setData(String data); + } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaRuleConstraint.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaRuleConstraint.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaRuleConstraint.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/IRutaRuleConstraint.java Tue Jun 4 16:59:07 2013 @@ -21,16 +21,10 @@ package org.apache.uima.ruta.cde; public interface IRutaRuleConstraint extends IRutaConstraint { - public String getRule(); - - public void setRule(String rule); - - public String getDescription(); public void setDescription(String s); - public String getTypeSystemLocation(); public void setTypeSystemLocation(String s); Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaConstraintFactory.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaConstraintFactory.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaConstraintFactory.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaConstraintFactory.java Tue Jun 4 16:59:07 2013 @@ -20,18 +20,15 @@ package org.apache.uima.ruta.cde; public class RutaConstraintFactory { - - public RutaConstraintFactory () { - super(); - } - public IRutaRuleConstraint createConstraint(String type) { - if (type.equals("SimpleTextMarkerConstraint")) { - return new SimpleRutaRuleConstraint("",""); - } - if (type.equals("ListTextMarkerConstraint")) { - return new RutaRuleListConstraint("",""); + public static IRutaConstraint createConstraint(String type) { + if (type.equals("SimpleRutaRuleConstraint")) { + return new SimpleRutaRuleConstraint("", ""); + } else if (type.equals("RutaRuleListConstraint")) { + return new RutaRuleListConstraint("", ""); + } else if(type.equals("RutaGEConstraint")) { + return new RutaGEConstraint("", ""); } - return null; + return null; } } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaGEConstraint.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaGEConstraint.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaGEConstraint.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaGEConstraint.java Tue Jun 4 16:59:07 2013 @@ -59,7 +59,6 @@ public class RutaGEConstraint implements } public Double processConstraint(CAS cas) throws Exception { - // TODO Auto-generated method stub // Constraint Format: "Peter":Author 0.44, Editor 0.50 // counts for sysouts, remove later int runCount = 0; @@ -113,10 +112,8 @@ public class RutaGEConstraint implements Type matchedType = cas.getTypeSystem().getType( "org.apache.uima.ruta.type.DebugMatchedRuleMatch"); - Type ruleApplyType = cas.getTypeSystem().getType( - "org.apache.uima.ruta.type.DebugRuleApply"); - Type blockApplyType = cas.getTypeSystem().getType( - "org.apache.uima.ruta.type.DebugBlockApply"); + Type ruleApplyType = cas.getTypeSystem().getType("org.apache.uima.ruta.type.DebugRuleApply"); + Type blockApplyType = cas.getTypeSystem().getType("org.apache.uima.ruta.type.DebugBlockApply"); removeDebugAnnotations(cas, matchedType, ruleApplyType, blockApplyType); double applyAmount = 0; @@ -172,7 +169,6 @@ public class RutaGEConstraint implements // calculate cosinus similarity for result values: return EvaluationMeasures.cosine(results); -// return getCosineSimilarity(results); } private void removeDebugAnnotations(CAS cas, Type matchedType, Type ruleApplyType, @@ -199,44 +195,6 @@ public class RutaGEConstraint implements return this.description; } - public double getCosineSimilarity(ArrayList<Double[]> results) { - - if (results.size() == 0) { - return 0; - } - - double sumATimesB = 0; - double sumA = 0; - double sumB = 0; - - for (Double[] resultPair : results) { - - double a = resultPair[0]; - double b = resultPair[1]; - - sumATimesB += (a * b); - sumA += Math.pow(a, 2); - sumB += Math.pow(b, 2); - } - - if (sumATimesB != 0) { - double sqrtA = Math.sqrt(sumA); - double sqrtB = Math.sqrt(sumB); - double result = sumATimesB / (sqrtA * sqrtB); - return result; - } - return 0; - - } - - public String getConstraintText() { - return this.constraintText; - } - - public void setConstraintText(String constraintText) { - this.constraintText = constraintText; - } - public void setDescription(String description) { this.description = description; } @@ -244,38 +202,44 @@ public class RutaGEConstraint implements public HashMap<String, Double> createRuleSet() { HashMap<String, Double> rulesMap = new HashMap<String, Double>(); try { - String content = FileUtils.file2String(new File(constraintText)); - -// System.out.println(content); - - String[] constraintTextArray = content.split("\n"); - for (String constraintLine : constraintTextArray) { - - String[] patternAndEstimates = constraintLine.split(":"); - String pattern = patternAndEstimates[0]; - pattern = pattern.trim(); - String estimates = patternAndEstimates[1]; - String[] singleEstimates = estimates.split(","); - - for (String singleEstimate : singleEstimates) { - singleEstimate = singleEstimate.trim(); - String[] typeAndRatio = singleEstimate.split("\\s+"); - String typeName = typeAndRatio[0]; - String ratio = typeAndRatio[1]; - ratio.trim(); - String rule = ""; - - if (pattern.startsWith("\"")) { - rule = pattern + "{PARTOF(" + typeName + ")};"; - } else { - rule = pattern + "{PARTOF(" + typeName + ")};"; + String content = FileUtils.file2String(new File(constraintText)); + + String[] constraintTextArray = content.split("\n"); + for (String constraintLine : constraintTextArray) { + + String[] patternAndEstimates = constraintLine.split(":"); + String pattern = patternAndEstimates[0]; + pattern = pattern.trim(); + String estimates = patternAndEstimates[1]; + String[] singleEstimates = estimates.split(","); + + for (String singleEstimate : singleEstimates) { + singleEstimate = singleEstimate.trim(); + String[] typeAndRatio = singleEstimate.split("\\s+"); + String typeName = typeAndRatio[0]; + String ratio = typeAndRatio[1]; + ratio.trim(); + String rule = ""; + + if (pattern.startsWith("\"")) { + rule = pattern + "{PARTOF(" + typeName + ")};"; + } else { + rule = pattern + "{PARTOF(" + typeName + ")};"; + } + rulesMap.put(rule, Double.valueOf(ratio)); } - rulesMap.put(rule, Double.valueOf(ratio)); } - } - }catch(IOException e) { + } catch (IOException e) { e.printStackTrace(); } return rulesMap; } + + public String getData() { + return constraintText; + } + + public void setData(String data) { + this.constraintText = data; + } } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaRuleListConstraint.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaRuleListConstraint.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaRuleListConstraint.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/RutaRuleListConstraint.java Tue Jun 4 16:59:07 2013 @@ -186,16 +186,7 @@ public class RutaRuleListConstraint impl } } - public String getRule() { - return rules; - } - - public void setRule(String rule) { - this.rules=rule; - } - public String getDescription() { - // TODO Auto-generated method stub return description; } @@ -211,4 +202,12 @@ public class RutaRuleListConstraint impl return typeSystemLocation; } + public String getData() { + return rules; + } + + public void setData(String data) { + this.rules = data; + } + } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/SimpleRutaRuleConstraint.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/SimpleRutaRuleConstraint.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/SimpleRutaRuleConstraint.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/SimpleRutaRuleConstraint.java Tue Jun 4 16:59:07 2013 @@ -174,14 +174,6 @@ public class SimpleRutaRuleConstraint im } } - public String getRule() { - return rule; - } - - public void setRule(String rule) { - this.rule=rule; - } - public String getDescription() { return StringUtils.isBlank(description) ? rule : description; } @@ -197,4 +189,13 @@ public class SimpleRutaRuleConstraint im public String getTypeSystemLocation() { return typeSystemLocation; } + + public String getData() { + return rule; + } + + public void setData(String data) { + this.rule = data; + } + } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintDialog.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintDialog.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintDialog.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintDialog.java Tue Jun 4 16:59:07 2013 @@ -57,7 +57,7 @@ public class ConstraintDialog extends Di public void create(SimpleRutaRuleConstraint constraint) { super.create(); - rule = constraint.getRule(); + rule = constraint.getData(); description = constraint.getDescription(); ruleText.setText(rule); @@ -66,7 +66,7 @@ public class ConstraintDialog extends Di public void create(RutaRuleListConstraint constraint) { super.create(); - rule = constraint.getRule(); + rule = constraint.getData(); description = constraint.getDescription(); ruleText.setText(rule); @@ -75,7 +75,7 @@ public class ConstraintDialog extends Di public void create (RutaGEConstraint constraint) { super.create(); - rule = constraint.getConstraintText(); + rule = constraint.getData(); description = constraint.getDescription(); ruleText.setText(rule); @@ -87,52 +87,6 @@ public class ConstraintDialog extends Di GridLayout layout = new GridLayout(); layout.numColumns = 3; parent.setLayout(layout); - // Label label0 = new Label(parent, SWT.FILL); - // label0.setText("TypeSystem :"); - // - // GridData label0GridData = new GridData(); - // label0GridData.grabExcessVerticalSpace = true; - // label0GridData.horizontalAlignment = GridData.CENTER; - // label0GridData.verticalAlignment = GridData.CENTER; - // label0GridData.minimumHeight = 25; - // label0GridData.horizontalSpan = 1; - // label0GridData.verticalIndent = 5; - // label0.setLayoutData(label0GridData); - // - // dirText = new Text(parent, SWT.SINGLE | SWT.BORDER); - // - // - // - // dirButton = new Button(parent, SWT.PUSH); - // dirButton.setSize(25, 25); - // GridData buttonGridData = new GridData(); - // buttonGridData.horizontalAlignment = GridData.CENTER; - // buttonGridData.verticalAlignment = GridData.CENTER; - // buttonGridData.horizontalSpan = 1; - // Image folderIcon = getImage("folder"); - // dirButton.setImage(folderIcon); - // buttonGridData.minimumHeight = 25; - // buttonGridData.minimumWidth = 25; - // dirButton.setLayoutData(buttonGridData); - // dirButton.addSelectionListener(new SelectionAdapter() { - // @Override - // public void widgetSelected(SelectionEvent event) { - // FileDialog dlg = new FileDialog(getShell()); - // dlg.setText("Input Directory"); - // String dir = dlg.open(); - // if (dir != null) { - // File f = new File(dir); - // dirText.setText(f.getAbsolutePath()); - // } - // } - // }); - // - // GridData dirTextGridData = new GridData(); - // dirTextGridData.grabExcessHorizontalSpace = true; - // dirTextGridData.horizontalAlignment = GridData.FILL; - // dirTextGridData.horizontalSpan = 1; - // dirTextGridData.minimumHeight = 25; - // dirText.setLayoutData(dirTextGridData); Label label1 = new Label(parent, SWT.FILL); label1.setText("Constraint Rule :"); Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectComposite.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectComposite.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectComposite.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectComposite.java Tue Jun 4 16:59:07 2013 @@ -23,6 +23,7 @@ import java.util.ArrayList; import java.util.Collections; import java.util.Comparator; import java.util.HashMap; +import java.util.List; import org.apache.uima.ruta.addons.RutaAddonsPlugin; import org.apache.uima.ruta.cde.IRutaConstraint; @@ -91,7 +92,7 @@ public class ConstraintSelectComposite e private TableEditor editor; - private ArrayList<ConstraintData> constraintList; + private List<ConstraintData> constraintList; private int EDITABLECOLUMN = 1; @@ -438,7 +439,7 @@ public class ConstraintSelectComposite e return images.get(name); } - public ArrayList<ConstraintData> getConstraintList() { + public List<ConstraintData> getConstraintList() { return this.constraintList; } @@ -452,7 +453,7 @@ public class ConstraintSelectComposite e IMemento currentMemento = memento.createChild("constraint", "SimpleRutaConstraint"); SimpleRutaRuleConstraint constraint = (SimpleRutaRuleConstraint) constraintData .getConstraint(); - currentMemento.createChild("Rule", constraint.getRule()); + currentMemento.createChild("Rule", constraint.getData()); currentMemento.createChild("Description", constraint.getDescription()); } @@ -460,14 +461,14 @@ public class ConstraintSelectComposite e IMemento currentMemento = memento.createChild("constraint", "ListRutaConstraint"); RutaRuleListConstraint constraint = (RutaRuleListConstraint) constraintData .getConstraint(); - currentMemento.createChild("Rule", constraint.getRule()); + currentMemento.createChild("Rule", constraint.getData()); currentMemento.createChild("Description", constraint.getDescription()); } if (constraintData.getConstraint() instanceof RutaGEConstraint) { IMemento currentMemento = memento.createChild("constraint", "GEConstraint"); RutaGEConstraint constraint = (RutaGEConstraint) constraintData.getConstraint(); - currentMemento.createChild("Rule", constraint.getConstraintText()); + currentMemento.createChild("Rule", constraint.getData()); currentMemento.createChild("Description", constraint.getDescription()); } } @@ -505,12 +506,7 @@ public class ConstraintSelectComposite e return RutaAddonsPlugin.getImageDescriptor(path).createImage(); } - // public void exportConstraint (ConstraintData data) { - // String type = ""; - // String ruleText = ""; - // String description = ""; - // } - public void setConstraints(ArrayList<ConstraintData> constraints) { + public void setConstraints(List<ConstraintData> constraints) { this.constraintList = constraints; } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectTableLabelProvider.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectTableLabelProvider.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectTableLabelProvider.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ConstraintSelectTableLabelProvider.java Tue Jun 4 16:59:07 2013 @@ -52,7 +52,7 @@ public class ConstraintSelectTableLabelP if(columnIndex == 0) { if(StringUtils.isBlank(data.getDescription()) && data.getConstraint() instanceof SimpleRutaRuleConstraint) { SimpleRutaRuleConstraint c = (SimpleRutaRuleConstraint) data.getConstraint(); - return c.getRule(); + return c.getData(); } else { return data.getDescription(); } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/DocumentViewRunHandler.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/DocumentViewRunHandler.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/DocumentViewRunHandler.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/DocumentViewRunHandler.java Tue Jun 4 16:59:07 2013 @@ -24,6 +24,7 @@ import java.io.FileInputStream; import java.net.URL; import java.util.ArrayList; import java.util.HashMap; +import java.util.List; import org.apache.uima.UIMAFramework; import org.apache.uima.cas.CAS; @@ -103,15 +104,15 @@ public class DocumentViewRunHandler impl private class DocumentViewRunHandlerJob extends Job { - private ArrayList<ConstraintData> constraints; + private List<ConstraintData> constraints; - private ArrayList<DocumentData> documents; + private List<DocumentData> documents; private File typeSystem; private String testDataPath; - DocumentViewRunHandlerJob(ExecutionEvent event, ArrayList<ConstraintData> constraints, + DocumentViewRunHandlerJob(ExecutionEvent event, List<ConstraintData> constraints, ArrayList<DocumentData> documents, File typeSystem, String testDataPath) { super("UIMA Ruta CDE"); this.constraints = constraints; @@ -213,7 +214,7 @@ public class DocumentViewRunHandler impl .showView("org.apache.uima.ruta.cde.ui.ConstraintSelectView"); ConstraintSelectComposite composite = (ConstraintSelectComposite) constraintView .getComposite(); - ArrayList<ConstraintData> constraintList = composite.getConstraintList(); + List<ConstraintData> constraintList = composite.getConstraintList(); DocumentView docView = (DocumentView) HandlerUtil.getActiveWorkbenchWindow(event).getWorkbench() .getActiveWorkbenchWindow().getActivePage() .showView("org.apache.uima.ruta.cde.ui.DocumentView"); Copied: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportConstraintsHandler.java (from r1489049, uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportAllConstraintsHandler.java) URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportConstraintsHandler.java?p2=uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportConstraintsHandler.java&p1=uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportAllConstraintsHandler.java&r1=1489049&r2=1489514&rev=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportAllConstraintsHandler.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ExportConstraintsHandler.java Tue Jun 4 16:59:07 2013 @@ -19,80 +19,59 @@ package org.apache.uima.ruta.cde.ui; -import java.util.ArrayList; +import java.util.List; +import org.apache.uima.ruta.addons.RutaAddonsPlugin; import org.apache.uima.ruta.cde.utils.ConstraintData; -import org.apache.uima.ruta.cde.utils.ConstraintXMLExporter; +import org.apache.uima.ruta.cde.utils.ConstraintXMLUtils; import org.eclipse.core.commands.ExecutionEvent; import org.eclipse.core.commands.ExecutionException; import org.eclipse.core.commands.IHandler; import org.eclipse.core.commands.IHandlerListener; +import org.eclipse.core.resources.IFile; +import org.eclipse.core.resources.IResource; +import org.eclipse.core.resources.IWorkspaceRoot; +import org.eclipse.core.resources.ResourcesPlugin; import org.eclipse.core.runtime.IPath; import org.eclipse.core.runtime.IProgressMonitor; import org.eclipse.core.runtime.IStatus; import org.eclipse.core.runtime.Path; import org.eclipse.core.runtime.Status; -import org.eclipse.core.runtime.jobs.IJobChangeEvent; import org.eclipse.core.runtime.jobs.Job; -import org.eclipse.core.runtime.jobs.JobChangeAdapter; import org.eclipse.swt.SWT; import org.eclipse.swt.widgets.FileDialog; import org.eclipse.ui.handlers.HandlerUtil; -public class ExportAllConstraintsHandler implements IHandler { +public class ExportConstraintsHandler implements IHandler { private class ExportAllConstraintsJob extends Job { - private IPath outputPath; + private String outputLocation; - private ArrayList<ConstraintData> constraints; + private List<ConstraintData> constraints; - ExportAllConstraintsJob(IPath outputPath, ArrayList<ConstraintData> constraints) { - super("Exporting all the constraints"); - this.outputPath = outputPath; + ExportAllConstraintsJob(String outputLocation, List<ConstraintData> constraints) { + super("Exporting constraints"); + this.outputLocation = outputLocation; this.constraints = constraints; - } public IStatus run(IProgressMonitor monitor) { - ConstraintXMLExporter exporter = new ConstraintXMLExporter(constraints); try { - exporter.saveConstraints(outputPath); - - //ResourcesPlugin.getWorkspace().getRoot().getFileForLocation(outputPath).getParent().refreshLocal(1, monitor); - - + ConstraintXMLUtils.writeConstraints(outputLocation, constraints); + IPath path = Path.fromPortableString(outputLocation); + IWorkspaceRoot root = ResourcesPlugin.getWorkspace().getRoot(); + IFile ifile = root.getFileForLocation(path); + if(ifile != null) { + ifile.getParent().refreshLocal(IResource.DEPTH_INFINITE, monitor); + } } catch (Exception e) { - e.printStackTrace(); + RutaAddonsPlugin.error(e); } return Status.OK_STATUS; } } - private class ExportAllConstraintsJobAdapter extends JobChangeAdapter { - - private ConstraintSelectComposite composite; - - ExportAllConstraintsJobAdapter(ConstraintSelectComposite composite) { - super(); - this.composite = composite; - } - - public void done(IJobChangeEvent event) { - if (event.getResult().isOK()) { - composite.getDisplay().asyncExec(new Runnable() { - public void run() { - try { - - } catch (Exception e) { - - } - } - }); - } - } - } - public void addHandlerListener(IHandlerListener arg0) { } @@ -104,12 +83,8 @@ public class ExportAllConstraintsHandler FileDialog dlg = new FileDialog(HandlerUtil.getActiveShell(event), SWT.SAVE); String[] extensions = new String[] { "*.xml" }; dlg.setFilterExtensions(extensions); -// String test = dlg.open(); String s = dlg.open(); - IPath outputPath = null; - if (s != null) { - outputPath = Path.fromPortableString(s); - } else { + if (s == null) { return Status.CANCEL_STATUS; } ConstraintSelectView constraintView; @@ -123,15 +98,11 @@ public class ExportAllConstraintsHandler .showView("org.apache.uima.ruta.cde.ui.ConstraintSelectView"); ConstraintSelectComposite composite = (ConstraintSelectComposite) constraintView .getComposite(); - ArrayList<ConstraintData> constraintList = composite.getConstraintList(); - - - - ExportAllConstraintsJob job = new ExportAllConstraintsJob(outputPath, constraintList); + List<ConstraintData> constraintList = composite.getConstraintList(); + ExportAllConstraintsJob job = new ExportAllConstraintsJob(s, constraintList); job.schedule(); - } catch (Exception e) { - e.printStackTrace(); + RutaAddonsPlugin.error(e); } return null; } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ImportConstraintsHandler.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ImportConstraintsHandler.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ImportConstraintsHandler.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/ui/ImportConstraintsHandler.java Tue Jun 4 16:59:07 2013 @@ -19,18 +19,16 @@ package org.apache.uima.ruta.cde.ui; -import java.util.ArrayList; +import java.util.List; import org.apache.uima.ruta.cde.utils.ConstraintData; -import org.apache.uima.ruta.cde.utils.ConstraintXMLImporter; +import org.apache.uima.ruta.cde.utils.ConstraintXMLUtils; import org.eclipse.core.commands.ExecutionEvent; import org.eclipse.core.commands.ExecutionException; import org.eclipse.core.commands.IHandler; import org.eclipse.core.commands.IHandlerListener; -import org.eclipse.core.runtime.IPath; import org.eclipse.core.runtime.IProgressMonitor; import org.eclipse.core.runtime.IStatus; -import org.eclipse.core.runtime.Path; import org.eclipse.core.runtime.Status; import org.eclipse.core.runtime.jobs.Job; import org.eclipse.swt.SWT; @@ -41,26 +39,22 @@ public class ImportConstraintsHandler im private class ImportJob extends Job { - IPath inputPath; + String inputLocation; ConstraintSelectComposite composite; - ArrayList<ConstraintData> constraints; - public ImportJob(ExecutionEvent event, ConstraintSelectComposite composite, IPath inputPath) { + public ImportJob(ExecutionEvent event, ConstraintSelectComposite composite, String inputLocation) { super("Importing constraints"); - this.inputPath = inputPath; + this.inputLocation = inputLocation; this.composite = composite; - constraints = new ArrayList<ConstraintData>(); } protected IStatus run(IProgressMonitor monitor) { - ConstraintXMLImporter importer = new ConstraintXMLImporter(); try { - constraints = importer.readXML(inputPath); - composite.setConstraints(constraints); + final List<ConstraintData> constraints = ConstraintXMLUtils.readConstraints(inputLocation); composite.getDisplay().asyncExec(new Runnable() { public void run() { - composite.setConstraints(constraints); - composite.getViewer().setInput(constraints); + composite.getConstraintList().addAll(constraints); + composite.getViewer().setInput(composite.getConstraintList()); composite.getViewer().refresh(); composite.update(); } @@ -95,9 +89,7 @@ public class ImportConstraintsHandler im dlg.setFilterExtensions(extensions); String s = dlg.open(); if (s != null) { - IPath path = Path.fromPortableString(s); - ImportJob job = new ImportJob(event, composite, path); - + ImportJob job = new ImportJob(event, composite, s); job.schedule(); } else { return Status.CANCEL_STATUS; Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/CDEComparatorFactory.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/CDEComparatorFactory.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/CDEComparatorFactory.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/CDEComparatorFactory.java Tue Jun 4 16:59:07 2013 @@ -26,139 +26,127 @@ import java.util.Locale; import org.eclipse.swt.widgets.TableColumn; public class CDEComparatorFactory { - + private int updown; - - public CDEComparatorFactory () { + + public CDEComparatorFactory() { updown = 1; } - - private Comparator<DocumentData> stringDocumentComparator = new Comparator <DocumentData>() { + + private Comparator<DocumentData> stringDocumentComparator = new Comparator<DocumentData>() { public int compare(DocumentData object1, DocumentData object2) { Collator collator = Collator.getInstance(); - + String docName1 = object1.getDocument().getName(); String docName2 = object2.getDocument().getName(); - + int result = collator.compare(docName1, docName2) * updown; return result; } }; - private Comparator<DocumentData> resultComparator = new Comparator <DocumentData> () { - + private Comparator<DocumentData> resultComparator = new Comparator<DocumentData>() { + public int compare(DocumentData object1, DocumentData object2) { - + double augment1 = object1.getAugmentedResult(); double augment2 = object2.getAugmentedResult(); - + if (augment1 <= augment2) { return 1 * updown; - } - else { - return -1 *updown; + } else { + return -1 * updown; } - + } }; - - -private Comparator<DocumentData> f1ScoreComparator = new Comparator <DocumentData> () { - + + private Comparator<DocumentData> f1ScoreComparator = new Comparator<DocumentData>() { + public int compare(DocumentData object1, DocumentData object2) { - + double augment1 = object1.getFMeasure(); double augment2 = object2.getFMeasure(); - + if (augment1 <= augment2) { return 1 * updown; - } - else { - return -1 *updown; + } else { + return -1 * updown; } - + } }; - - - - - private Comparator<ConstraintData> stringConstraintComparator = new Comparator <ConstraintData>() { + + private Comparator<ConstraintData> stringConstraintComparator = new Comparator<ConstraintData>() { public int compare(ConstraintData object1, ConstraintData object2) { Collator collator = Collator.getInstance(); - + String constraintName1 = object1.getDescription(); String constraintName2 = object2.getDescription(); - + int result = collator.compare(constraintName1, constraintName2) * updown; return result; } - + }; - - private Comparator<ConstraintData> intConstraintComparator = new Comparator <ConstraintData> () { - - public int compare(ConstraintData object1, ConstraintData object2) {; - + + private Comparator<ConstraintData> intConstraintComparator = new Comparator<ConstraintData>() { + + public int compare(ConstraintData object1, ConstraintData object2) { + ; + int weight1 = object1.getWeight(); int weight2 = object2.getWeight(); - - return (weight1-weight2) * updown; + + return (weight1 - weight2) * updown; } - + }; - - private Comparator <String[]> resultNameComparator = new Comparator<String[]> () { + + private Comparator<String[]> resultNameComparator = new Comparator<String[]>() { public int compare(String[] object1, String[] object2) { - + Collator collator = Collator.getInstance(Locale.getDefault()); int result = collator.compare(object1[0], object2[0]) * updown; return result; } }; - - private Comparator <String[]> resultValueComparator = new Comparator<String[]> () { - public int compare(String[] object1, String[] object2) { + + private Comparator<String[]> resultValueComparator = new Comparator<String[]>() { + public int compare(String[] object1, String[] object2) { double result1 = Double.valueOf(object1[1]); double result2 = Double.valueOf(object2[1]); if (result1 >= result2) return 1 * updown; else { - return -1 *updown; + return -1 * updown; } } }; - - public Comparator getComparator (TableColumn tc) { + + public Comparator getComparator(TableColumn tc) { this.updown = updown * (-1); String columnName = tc.getText(); - if(columnName.equals("CDE")) { + if (columnName.equals("CDE")) { return resultComparator; } - if(columnName.equals( "F1")) { + if (columnName.equals("F1")) { return f1ScoreComparator; - } - else if (columnName.equals("Document")) { + } else if (columnName.equals("Document")) { return stringDocumentComparator; - } - else if (columnName.equals("Constraint")) { + } else if (columnName.equals("Constraint")) { return stringConstraintComparator; - } - else if (columnName.equals("Weight")) { - return intConstraintComparator; - } - else if (columnName.equals("Constraint ")) { + } else if (columnName.equals("Weight")) { + return intConstraintComparator; + } else if (columnName.equals("Constraint ")) { return resultNameComparator; - } - else if (columnName.equals("Result")) { + } else if (columnName.equals("Result")) { return resultValueComparator; } return Collator.getInstance(); } - - -} +} Added: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintContentHandler.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintContentHandler.java?rev=1489514&view=auto ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintContentHandler.java (added) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintContentHandler.java Tue Jun 4 16:59:07 2013 @@ -0,0 +1,66 @@ +/* + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ + +package org.apache.uima.ruta.cde.utils; + +import java.util.ArrayList; +import java.util.List; + +import org.apache.uima.ruta.cde.IRutaConstraint; +import org.apache.uima.ruta.cde.RutaConstraintFactory; +import org.xml.sax.Attributes; +import org.xml.sax.helpers.DefaultHandler; + +public class ConstraintContentHandler extends DefaultHandler { + + private List<ConstraintData> constraints = new ArrayList<ConstraintData>(); + + private ConstraintData current = null; + + private String currentString; + + public void startElement(String uri, String localName, String qName, Attributes attributes) { + if (localName.equals("constraint")) { + String type = attributes.getValue("type"); + String weight = attributes.getValue("weight"); + IRutaConstraint c = RutaConstraintFactory.createConstraint(type); + current = new ConstraintData(c); + current.setWeight(Integer.valueOf(weight)); + } + } + + public void characters(char[] ch, int start, int length) { + currentString = new String(ch, start, length); + } + + public void endElement(String uri, String localName, String qName) { + if (localName.equals("constraint")) { + constraints.add(current); + } else if (localName.equals("data")) { + current.getConstraint().setData(currentString); + } else if (localName.equals("description")) { + current.getConstraint().setDescription(currentString); + } + } + + public List<ConstraintData> getConstraints() { + return constraints; + } + +} Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintData.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintData.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintData.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintData.java Tue Jun 4 16:59:07 2013 @@ -22,35 +22,54 @@ package org.apache.uima.ruta.cde.utils; import org.apache.uima.ruta.cde.IRutaConstraint; public class ConstraintData { - - private IRutaConstraint constraint; - - private int weight; - - public ConstraintData (IRutaConstraint constraint) { - this.constraint = constraint; - weight = 1; - } - - public int getWeight() { - return weight; - } - - public void setWeight(int weight) { - this.weight = weight; - } - - public IRutaConstraint getConstraint () { - return constraint; - } - - public void setConstraint (IRutaConstraint constraint) { - this.constraint= constraint; - } - - public String getDescription () { - return constraint.getDescription(); - } - + + private IRutaConstraint constraint; + + private int weight; + + public ConstraintData(IRutaConstraint constraint) { + this.constraint = constraint; + weight = 1; + } + + public int getWeight() { + return weight; + } + + public void setWeight(int weight) { + this.weight = weight; + } + + public IRutaConstraint getConstraint() { + return constraint; + } + + public void setConstraint(IRutaConstraint constraint) { + this.constraint = constraint; + } + + public String getDescription() { + return constraint.getDescription(); + } + + public String toXML() { + StringBuilder sb = new StringBuilder(); + sb.append("<constraint type=\"" + constraint.getClass().getSimpleName() + "\" weight=\""+weight+"\">"); + sb.append("\n"); + sb.append("<data>"); + sb.append("<![CDATA["); + sb.append(constraint.getData()); + sb.append("]]>"); + sb.append("</data>"); + sb.append("\n"); + sb.append("<description>"); + sb.append("<![CDATA["); + sb.append(getDescription()); + sb.append("]]>"); + sb.append("</description>"); + sb.append("\n"); + sb.append("</constraint>"); + return sb.toString(); + } } Copied: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLUtils.java (from r1489049, uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLExporter.java) URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLUtils.java?p2=uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLUtils.java&p1=uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLExporter.java&r1=1489049&r2=1489514&rev=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLExporter.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/ConstraintXMLUtils.java Tue Jun 4 16:59:07 2013 @@ -19,113 +19,39 @@ package org.apache.uima.ruta.cde.utils; -import java.util.ArrayList; - -import org.eclipse.core.runtime.IPath; - -@SuppressWarnings("restriction") -public class ConstraintXMLExporter { - - IPath outputPath; - - ArrayList<ConstraintData> constraints; - - public ConstraintXMLExporter(ArrayList<ConstraintData> constraints) { - this.outputPath = outputPath; - this.constraints = constraints; +import java.io.File; +import java.io.FileReader; +import java.util.List; + +import org.apache.commons.io.FileUtils; +import org.xml.sax.InputSource; +import org.xml.sax.XMLReader; +import org.xml.sax.helpers.XMLReaderFactory; + +public class ConstraintXMLUtils { + + public static void writeConstraints(String location, List<ConstraintData> constraints) + throws Exception { + StringBuilder sb = new StringBuilder(); + sb.append("<?xml version=\"1.0\" encoding=\"UTF-8\"?>"); + sb.append("\n"); + sb.append("<constraints>"); + sb.append("\n"); + for (ConstraintData eachConstraint : constraints) { + sb.append(eachConstraint.toXML()); + sb.append("\n"); + } + sb.append("</constraints>"); + FileUtils.writeStringToFile(new File(location), sb.toString(), "UTF-8"); } - public void saveConstraints(IPath outputPath) throws Exception { - -// IWorkspace workspace = ResourcesPlugin.getWorkspace(); -// IWorkspaceRoot root = workspace.getRoot(); -// String rootPath = root.getRawLocation().toPortableString(); - -// if(outputPath.getFileExtension() == null) { -// outputPath = outputPath.addFileExtension("xml"); -// -// System.out.println("adsf :" + outputPath.toOSString()); -// } else if -// -// (!outputPath.getFileExtension().equals("xml")) { -// outputPath.removeFileExtension(); -// outputPath = outputPath.addFileExtension("xml"); -// } - -// String absolutPath = rootPath + System.getProperty("file.separator") + outputPath.toOSString(); -// String absolutPath = outputPath.toOSString(); -// File file = new File(absolutPath); -// -// -// file.createNewFile(); -// -// -// -// // outputPath = Path.fromOSString("C:/test/test1.xml"); -// // Create a XMLOutputFactory -// XMLOutputFactory outputFactory = XMLOutputFactory.newInstance(); -// // Create XMLEventWriter -// XMLEventWriter eventWriter = outputFactory.createXMLEventWriter(new FileOutputStream(absolutPath)); -// // Create a EventFactory -// XMLEventFactory eventFactory = XMLEventFactory.newInstance(); -// XMLEvent end = eventFactory.createDTD("\n"); -// // Create and write Start Tag -// StartDocument startDocument = eventFactory.createStartDocument(); -// eventWriter.add(startDocument); -// StartElement constraintListStartElement = eventFactory.createStartElement("", "", -// "constraintList"); -// eventWriter.add(constraintListStartElement); -// eventWriter.add(end); -// -// for (ConstraintData data : constraints) { -// String constraintType = ""; -// if (data.getConstraint() instanceof IAugurTMConstraint) { -// IAugurTMConstraint constraint = (IAugurTMConstraint) data.getConstraint(); -// -// if (constraint instanceof SimpleRutaConstraint) { -// constraintType = "SimpleRutaConstraint"; -// -// } -// if (constraint instanceof ListRutaConstraint) { -// constraintType = "ListRutaConstraint"; -// } -// -// StartElement constraintStartElement = eventFactory.createStartElement("", "", -// constraintType); -// eventWriter.add(constraintStartElement); -// eventWriter.add(end); -// -// createNode(eventWriter, "rule", constraint.getRule()); -// } -// createNode(eventWriter, "description", data.getDescription()); -// createNode(eventWriter, "weight", String.valueOf(data.getWeight())); -// eventWriter.add(eventFactory.createEndElement("", "", constraintType)); -// eventWriter.add(end); -// } -// eventWriter.add(eventFactory.createEndElement("", "", "constraintList")); -// eventWriter.add(end); -// eventWriter.add(eventFactory.createEndDocument()); -// eventWriter.close(); + public static List<ConstraintData> readConstraints(String location) throws Exception { + XMLReader xmlReader = XMLReaderFactory.createXMLReader(); + FileReader reader = new FileReader(location); + InputSource inputSource = new InputSource(reader); + ConstraintContentHandler handler = new ConstraintContentHandler(); + xmlReader.setContentHandler(handler); + xmlReader.parse(inputSource); + return handler.getConstraints(); } - -// private void createNode(XMLEventWriter eventWriter, String name, String value) -// throws XMLStreamException { -// -// XMLEventFactory eventFactory = XMLEventFactory.newInstance(); -// XMLEvent end = eventFactory.createDTD("\n"); -// XMLEvent tab = eventFactory.createDTD("\t"); -// // Create Start node -// StartElement sElement = eventFactory.createStartElement("", "", name); -// eventWriter.add(tab); -// eventWriter.add(sElement); -// // Create Content -// Characters characters = eventFactory.createCharacters(value); -// eventWriter.add(characters); -// // Create End node -// EndElement eElement = eventFactory.createEndElement("", "", name); -// eventWriter.add(eElement); -// eventWriter.add(end); -// -// } - } Modified: uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/EvaluationMeasures.java URL: http://svn.apache.org/viewvc/uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/EvaluationMeasures.java?rev=1489514&r1=1489513&r2=1489514&view=diff ============================================================================== --- uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/EvaluationMeasures.java (original) +++ uima/sandbox/ruta/trunk/ruta-ep-addons/src/main/java/org/apache/uima/ruta/cde/utils/EvaluationMeasures.java Tue Jun 4 16:59:07 2013 @@ -20,15 +20,12 @@ package org.apache.uima.ruta.cde.utils; import java.text.DecimalFormat; -import java.text.NumberFormat; import java.util.ArrayList; import java.util.Locale; import org.apache.commons.math3.linear.ArrayRealVector; import org.apache.commons.math3.stat.correlation.PearsonsCorrelation; import org.apache.commons.math3.stat.correlation.SpearmansCorrelation; -import org.apache.commons.math3.stat.inference.ChiSquareTest; -import org.apache.commons.math3.stat.inference.TestUtils; public class EvaluationMeasures {