swagle commented on a change in pull request #1146: HDDS-1366. Add ability in 
Recon to track the number of small files in an Ozone Cluster
URL: https://github.com/apache/hadoop/pull/1146#discussion_r309347235
 
 

 ##########
 File path: 
hadoop-ozone/ozone-recon/src/main/java/org/apache/hadoop/ozone/recon/tasks/FileSizeCountTask.java
 ##########
 @@ -0,0 +1,231 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ * <p>
+ * http://www.apache.org/licenses/LICENSE-2.0
+ * <p>
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.apache.hadoop.ozone.recon.tasks;
+
+import com.google.inject.Inject;
+import org.apache.commons.lang3.tuple.ImmutablePair;
+import org.apache.commons.lang3.tuple.Pair;
+import org.apache.hadoop.ozone.om.OMMetadataManager;
+import org.apache.hadoop.ozone.om.helpers.OmKeyInfo;
+import org.apache.hadoop.utils.db.Table;
+import org.apache.hadoop.utils.db.TableIterator;
+import org.hadoop.ozone.recon.schema.tables.daos.FileCountBySizeDao;
+import org.hadoop.ozone.recon.schema.tables.pojos.FileCountBySize;
+import org.jooq.Configuration;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+
+import java.io.IOException;
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.Iterator;
+import java.util.List;
+
+/**
+ * Class to iterate over the OM DB and store the counts of existing/new
+ * files binned into ranges (1KB, 10Kb..,10MB,..1PB) to the Recon
+ * fileSize DB.
+ */
+public class FileSizeCountTask extends ReconDBUpdateTask {
+  private static final Logger LOG =
+      LoggerFactory.getLogger(FileSizeCountTask.class);
+
+  private int maxBinSize = 41;
+  private long maxFileSizeUpperBound = 1125899906842624L;
+  private long SIZE_512_TB = 562949953421312L;
+  private long[] upperBoundCount = new long[maxBinSize];
+  private long ONE_KB = 1024L;
+  private Collection<String> tables = new ArrayList<>();
+  private FileCountBySizeDao fileCountBySizeDao;
+
+  @Inject
+  public FileSizeCountTask(OMMetadataManager omMetadataManager,
+      Configuration sqlConfiguration) {
+    super("FileSizeCountTask");
+    try {
+      tables.add(omMetadataManager.getKeyTable().getName());
+      fileCountBySizeDao = new FileCountBySizeDao(sqlConfiguration);
+    } catch (Exception e) {
+      LOG.error("Unable to fetch Key Table updates ", e);
+    }
+  }
+
+  /**
+   * Read the Keys from OM snapshot DB and calculate the upper bound of
+   * File Size it belongs to.
+   *
+   * @param omMetadataManager OM Metadata instance.
+   * @return Pair
+   */
+  @Override
+  public Pair<String, Boolean> reprocess(OMMetadataManager omMetadataManager) {
+    LOG.info("Starting a 'reprocess' run of FileSizeCountTask.");
+
+    fetchUpperBoundCount("reprocess");
+
+    Table<String, OmKeyInfo> omKeyInfoTable = omMetadataManager.getKeyTable();
+    try (TableIterator<String, ? extends Table.KeyValue<String, OmKeyInfo>>
+        keyIter = omKeyInfoTable.iterator()) {
+      while(keyIter.hasNext()) {
+        Table.KeyValue<String, OmKeyInfo> kv = keyIter.next();
+        countFileSize(kv.getValue());
+      }
+
+    } catch (IOException ioEx) {
+      LOG.error("Unable to populate File Size Count in Recon DB. ", ioEx);
+      return new ImmutablePair<>(getTaskName(), false);
+    } finally {
+      populateFileCountBySizeDB();
+    }
+
+    LOG.info("Completed a 'reprocess' run of FileSizeCountTask.");
+    return new ImmutablePair<>(getTaskName(), true);
+  }
+
+  private void fetchUpperBoundCount(String type) {
+    if(type.equals("process")) {
+      List<FileCountBySize> resultSet = fileCountBySizeDao.findAll();
+      int index = 0;
+      if(resultSet != null) {
+        for (FileCountBySize row : resultSet) {
+          upperBoundCount[index] = row.getCount();
+          index++;
+        }
+      }
+    } else {
+      upperBoundCount = new long[maxBinSize];
+    }
+  }
+
+  @Override
+  protected Collection<String> getTaskTables() {
+    return tables;
+  }
+
+  /**
+   * Read the Keys from update events and update the count of files
+   * pertaining to a certain upper bound.
+   *
+   * @param events Update events - PUT/DELETE.
+   * @return Pair
+   */
+  @Override
+  Pair<String, Boolean> process(OMUpdateEventBatch events) {
+    LOG.info("Starting a 'process' run of FileSizeCountTask.");
+    Iterator<OMDBUpdateEvent> eventIterator = events.getIterator();
+
+    fetchUpperBoundCount("process");
+
+    while (eventIterator.hasNext()) {
+      OMDBUpdateEvent<String, OmKeyInfo> omdbUpdateEvent = 
eventIterator.next();
+      String updatedKey = omdbUpdateEvent.getKey();
+      OmKeyInfo updatedValue = omdbUpdateEvent.getValue();
+
+      try{
+        switch (omdbUpdateEvent.getAction()) {
+        case PUT:
+          updateUpperBoundCount(updatedValue, "PUT");
+          break;
+
+        case DELETE:
+          updateUpperBoundCount(updatedValue, "DELETE");
+          break;
+
+        default: LOG.trace("Skipping DB update event : " + omdbUpdateEvent
+                  .getAction());
+        }
+      } catch (IOException e) {
+        LOG.error("Unexpected exception while updating key data : {} {}",
+                updatedKey, e.getMessage());
+        return new ImmutablePair<>(getTaskName(), false);
+      } finally {
+        populateFileCountBySizeDB();
+      }
+    }
+    LOG.info("Completed a 'process' run of FileSizeCountTask.");
+    return new ImmutablePair<>(getTaskName(), true);
+  }
+
+  /**
+   * Calculate the bin index based on size of the Key.
+   *
+   * @param dataSize Size of the key.
+   * @return int bin index in upperBoundCount
+   */
+  private int calcBinIndex(long dataSize) {
+    if(dataSize >= maxFileSizeUpperBound) {
+      return Integer.MIN_VALUE;
+    } else if (dataSize > SIZE_512_TB) {
+      //given the small difference in 512TB and 512TB + 1B, index for both 
would
+      //return same, to differentiate specific condition added.
+      return maxBinSize - 1;
+    }
+    int logValue = (int) Math.ceil(Math.log(dataSize)/Math.log(2));
+    if(logValue < 10){
 
 Review comment:
   formatting, space between if and (
   In many places.

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