Matt Cliff wrote:
The numerical root solving methods are completely independant of the numerical derivative routines. This doesnt quite make sense to me. The Solver implemenations are Root solver routines which address the question of which value for x exists between (min,max) such that f(x) = 0.


On a programmatic level its even more abstract than that A solver simply is solving for UnivariateRealFunction.value(double d) so the function you could be solving for could represent a Cubic or Polynomial or a derivative of that Cubic/Polynomial.


Now I think I'm grasping this better, in your case, you do not actually have an analytical solution for what we are identifying as the functions getFirstDerivative or getSecondDerivative.

The numerical derivative routines estimate the value of the limit of (f(x+h)-f(x))/h as h approaches 0.

  I dont understand why (or how) a Bisection Solver routine would address
the question of approximating the derivative of a function at a point.


No, this just me misinterpreting the problem. I went back and reviewed Numerical Derivations And understand I misinterpreted you.




How would the BisectionSolver be related to an estimate for the Derivative?



Ignore that from algorithm standpoint, lets think more about how Numerical Derivation fits into or existing infrastructure.


I was thinking along the lines of having an implementation of a numerical derivative solver that take a function and a value of h as a parameter and return a function. something like
----------------------------------------------------
public class DefaultForwardDerivative {
private Function f = null;
private double h = 0.0;
public DefaultForwardDerivative( Function f, double h ) {
this.f = f;
this.h = h;
}


  // this should also have some upper limit on the
  //   absolute value of the return function
  //   so we dont introduce singularities
  public double value( double x ) throws MathException {
    double y0 = f.value( x );
    double y1 = f.value( x + h);

    return (( y1 - y0 ) / h);
  }

}

Yes, this fits in very well architecturally with the idea Brent is discussion about "decorator" functions. Is this an implementation of UnivariateRealFunction?



--------------------------------------------------

A Factory could be placed in front to pull this or a backward (use -h value), or centered, or multi-point estimate for the derivative. The factory would hide the 'h' value with some default.

The second (or higher) derivative could be obtained as follows

------------------------------------
DerivativeFactory factory = DeriviateFactory.getInstance();


  Function f = new SomeUserFunction();
  Function g = factory.derivative( f );
  Function h = factory.deritivate( g );

Is this factory.derivative vs. factory.deritivate a typo or intentional? Are these both t he same method?



------------------------------------ In this example, f' = g, and g' = h, and f'' = h...




I agree with Brent that these should be "Decorators" or Functions that wrap another function. Much in the way your suggesting yourself. I think there should be a means of making the code thats going to be Numerically approximating this solution more transparent to the user. Take for instance our current "Solver" strategy. Maybe solvers should just be "Functions" in and of themselves. This means that a Solver would look more like this:

UnivariateRealSolver solver = UnivariateRealSolverFactory.newInstance().newSecantSolver(somefunction);
/* this factory instantiation pattern is a little verbose */


solver.setMin(...);
solver.setMax(...);
solver.setStartingPoint(...);

double d = solver.value(x); /*where x = 0 or any other value you want to solve for.*/


But, lets try not to let the "Factory" design pattern get in the way here. Lets look at your above example and rework it without factory pattern, just using constructors this would look like this (I changed the variables so I can use "h" again.


Function e = new SomeUserFunction();

Function f = new CenteredDerivative();
f.setFunction(e);

Function g = new CenteredDerivative();
g.setFunction(f);

double result = g.value(x);

then calling g.value(x) would use Centered approaches to Numerically estimate e'' = g.

So for:

(f(x+h)-f(x))/h

you would need to set a property of the "CenteredDerivative" that may be adjusted. I suspect this property is actually setting the starting "h" value? This could be done, as a property, or in the constructor, but I would approach the initial implementations very much as beans.

double h = ...;
Function e = new SomeUserFunction();

Function f = new CenteredDerivative();
f.setFunction(e);
f.setInterval(h);

Function g = new CenteredDerivative();
g.setFunction(f);
g.setInterval(h);

double result = g.value(x);


Then you'd use a factory to set this "globally" or "transparently" to the user.


DerviativeFactory factory = DerviativeFactory.newInstance();
factory.setInterval(0.5);

Function e = new SomeUserFunction();
Function f = DerviativeFactory.newCenteredDerivative(e);
Function g = DerviativeFactory.newCenteredDerivative(f);

double result = g.value(x);

Then the factory becomes a wrapper that simply constructs beans and sets their properties. The user can use the factory or the beans directly. This is the same way that allot of factory api's do work, for instance in SAX or JAXP you could instantiate the XMLReaders, Transformers, Documents by hand (which may be tedious for some, but necessary for others) or you can use the Factory to instantiate an object with a bunch of predetermined defaults. Currently this is the way much of the stats package is working.

So yes, in your first email I would approach (2) over (1) and I would recommend that Solvers go in the same direction and have solvers be Functions too. But I would also recommend first approaching the actual "Derivative Functions" as Beans that can be instantiated and configured easily using properties and default constructors. Then the Factories are more flexible and less restrictive to advanced users.



On Tue, 11 Nov 2003, Mark R. Diggory wrote:



Bear with me, I'm trying to catchup a little bit here.

My first thought here is, how is calling Function.value(x) different
from calling Function.firstDerivative(x)? We don't really implement a
"Evaluator" or "EvaluatorFactory" for returning a function's
Function.value(x). We only provide Solvers and Solver factories for
different ways of Numerically solving the Functions value(x) method for 0.

Will a Differentiator/Factory be solving for the derivative? In which
case, as the algorithms used are really already implemented in the
solvers, wouldn't we just expand them with methods that allow us to
solve for the derivatives? For Example:

UnivariateRealSolver bs = new BisectionSolver(...);

double d = bs.solveFirstDerivative(min,max);

and

double d = bs.solveSecondDerivative(min,max);

-Mark

Matt Cliff wrote:

I have been scratching out an implementation of a numerical derivative to add to the commons-math and keep going back and forth between two approaches.

(all this would be in the o.a.c.math.analysis package)
(for brevity I have omitted the prefix UnivariateReal* )
--------------------------------------------------------------------
(1) a couple classes like Differentiator (interface) and DifferentiatorFactory (class), where we have a method like
"Differentiator DifferentiatorFactory.getDefaultDifferentiator( Function f )"


 and another method like "double Differentiator.derivate( double x)"
    or  "double Differentiator.value(double x)"

this keeps the same type of pattern as that of the *Solver

OR

 (2) Add a class like DerivativeFactory which has a method like
       "Function DerivativeFactory.getDefaultDerivative( Function f )"

and use the existing "double Function.value( double x)" to obtain the numerical estimate.


I first implemented it using approach (1) but as the code and usage turned out, it seems that (2) was easier to use (and numerically has the same number or operations and function evaluations).




---------------------------------------------------------------------- using (2) the client code would look like

public myMethod() {
UnivariateRealFunction f = new SomeUserDefinedFunction();
UnivariateRealFunction fprime = DerivativeFactory.newInstance().getDefaultDerivative( f );


  System.out.println( "f'(1.0) = "+ fprime.value(1.0) );
}


-------------------------------------------------------------------------


of course the Factory could allow for multiple types of Derivatives, the one I have currently implemented is a centered 5-point algorithm, which has an operational parameter of h (or a step-size), there may also be parameters to handle "infinite" derivative or jumps.







-- Mark Diggory Software Developer Harvard MIT Data Center http://osprey.hmdc.harvard.edu

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