I fixed this by adding "state=fullscreen" to the "above" category in
the Window Rules plugin. I am marking this bug as invalid because it is
a design "feature" that gnome-panel is excepted from the rule that
fullscreen windows are above all.
** Changed in: compiz (Ubuntu)
Status: Confirmed => Invalid
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https://bugs.launchpad.net/bugs/502309
Title:
gnome panel appears over fullscreen windows when changing viewport
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