Hi, Paul:
Thank you very much for your comment.
In such case, Coot-linux does not have the function of phosphorylate residues
without CCP4 install.
Regard
Bo
Paul Emsley <paul.ems...@bioch.ox.ac.uk> wrote:
> SUBSCRIBE COOT Bo wrote:
>> Hi,
>>
>> I install coot in linux (Fedora 8). It runs OK until when I try to
>> phosphorylate residues.
>>
>> Here is the messag:
>>
>> (monomer-molecule-from-3-let-code "SEP" "")
>> passing libcheck these data lines: ("N" "MON SEP" "")
>> which: no libcheck in
>>
>> (/home/Yang/Download/coot/coot-Linux-i386-fedora-6-gtk1/bin:/usr/kerberos/bin:/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/Yang/bin)
>> command "libcheck" not found
>> INFO:: libcheck status: #t
>> (get-monomer "SEP")
>>
>> At the end, the residue is not phosphorylated.
>
>
> command "libcheck" not found, means that libcheck has not been found in
> the path.
>
> libcheck is the program that generates the coordinates (in this case, of
> a SEP). Libcheck is part of the CCP4 suite.
>
> HTH,
>
> Paul
