The latest Coot appears to fail (I have revision 2641 I built yesterday) on Karmic) to get the models/maps from EDS server. The appropriate files in the coot-download folder contain errors like these:
The requested URL /eds/sfd/1ulr/pdb1ulr.ent was not found on this server. What I noticed is that the "coordinate" link at EDS website looks like this: http://eds.bmc.uu.se/eds/dfs/ul/1ulr/pdb1ulr.ent I don't know if something changed at Uppsala, but wget fails to retrieve, for instance, the example listed in scheme/get-ebi.scm http://eds.bmc.uu.se/eds/sfd/1cbs/pdb1cbs.ent I took liberty to learn a little scheme and edited couple of lines in the file and it seems to work now. I attach the patch-file (to apply it, do "patch get-ebi.scm get_ebi_scm.patch"). I don't know if the changes at EDS are temporary. Certainly, use at your own risk. Cheers, Ed. -- Coot est verendus
166c166,167 < (eds-url (string-append eds-site "/sfd/")) --- > (two-letter-id (substring down-id 1 3)) > (eds-url (string-append eds-site "/dfs/" two-letter-id "/"))
