Hi, I tried the suggested ways below but when neither worked. I didn't use fink to reinstall the 10.5 version. I downloaded a stand-alone version and unpacked everything to /Library/Coot. Then I tried source /Library/Coot/bin/init.sh coot ...which is when I get the error. When I check with otool -l /Library/Coot/bin/coot-real as suggested I do get this in my output:
Load command 4 cmd ?(0x80000022) Unknown load commandAny other suggestions? Thanks, Krystle > Date: Thu, 7 Apr 2011 10:41:27 +0100 > From: [email protected] > Subject: Re: Coot won't run OSX 10.5.8 > To: [email protected] > > Hi, > > On Wed, 2011-04-06 at 14:14 -0700, William G. Scott wrote: > > On Apr 6, 2011, at 12:50 PM, Krystle Williams wrote: > > > > > Hi, > > > I had installed Coot v. 0.6-pre-1 successfully using fink a couple years > > > ago on an Intel iMac running OSX 10.5.8. Last week I tried to update it > > > with fink. When that failed, I ended up downloading a new build from > > > http://sage.ucsc.edu/~wgscott/xtal/wiki/index.php/Stand-Alone_Coot, > > > failing to notice the 10.6 in the label and installed it. > > > > Sorry, but I don't have an intel machine running 10.5 (and my ppc is about > > to die). > > > > > After I realized this I removed that version, found the correct (previous > > > version I had installed) version on the site and reinstalled. > > > > > > Problem is when I type coot into X11 terminal I get this error: > > > > > > dyld: unknown required load command 0x80000022 > > > /Libary/Coot/bin/coot: line 6: 39888 TRace/BPT trap > > > /Library/Coot/bin/coot-real "$@" > > This is the error you normally get when running a binary on a 10.5 > system that was built on a 10.6 system. (It can in principle be avoided > by setting the environment variable MACOSX_DEPLOYMENT_TARGET=10.5 at > build time, but for an application like Coot with a very complex build > procedure I guess that there is a possibility that this won't work.) > > > > > My guess is your path is pointing to /usr/local/bin/coot. Delete that > > script if you haven't already, or just issue > > > > /sw/bin/coot > > This may well help, but the fact that you are getting this error shows > that your attempt to remove the 10.6 version of Coot that you installed > by mistake was not completely successful. You can double-check for this > by doing: > > otool -l /Library/Coot/bin/coot-real > > If the output contains: > > Load command 4 > cmd ?(0x80000022) Unknown load command > > (maybe with a different number after "Load command"), you definitely > have a 10.6-only binary. > > The corresponding output on a 10.6 system would look like this: > > Load command 4 > cmd LC_DYLD_INFO_ONLY > > Maybe others on this list can advise on how to do a complete uninstall > of the 10.6-only version. > > Regards, > Peter. > > > > > > > > > Coot opens fine through Phenix, I just can't seem to open it > > > independently anymore. > > > > > > Any suggestions for fixing this? > > > > > > Thanks, > > > Krystle > > -- > Peter Keller Tel.: +44 (0)1223 353033 > Global Phasing Ltd., Fax.: +44 (0)1223 366889 > Sheraton House, > Castle Park, > Cambridge CB3 0AX > United Kingdom
