set_refinement_immediate_replacement(1) should stop Coot from prompting you. I think you'll still need to call accept_regularizement() after you run the refinement to actually accept the results.

In case your interested, set_refinement_immediate_replacement(0) will set it back, and refinement_immediate_replacement_state() will tell you what the current setting is.

    - Kevin

On 8/4/2011 10:53 PM, Yong Xiong wrote:
Hi all,

Does anyone know the command to accept the result of rigid-body-refine-zone in 
a script without the display? accept_regularizement does not seem to work.

Thanks,
Yong

Reply via email to