When I try to look at the output of a SHELX search for selenium atoms from SAD
data the appearance of the map (after opening .hat,.pha and .phs files output
by SHELX) varies depending on whether I open them directly or open them
automatically by running a previous auto-save state file on opening up coot.
The map obtained after closing coot, re-opening it and running the auto-save
state file in fact looks much more like what I'm expecting. I'm using coot
version 0.6.2. My data are in spacegroup R 32 (155).