Sorry to bother you with this question but I´m having some troubles when loading smiles of new synthesize ligands for fitting.
First I was using an older version of Coot and after File=>smiles, an error message showed up (related to ccp4 libcheck connection). Apparently this happens when ccp4 is not installed on the computer (or so I've read after google it), what's a bit puzzling since ccp4 is already installed in my computer (Mac OS Lion 10.7.5) …. As I'm not an expert on computers I though this could be some kind of bug due to Lion (??) … Anyway, I realized that there is a new version of coot (v0.7.0) and hoping this version has fixed this "ghost bug", I downloaded it and installed from ccp4 coot-0.7.0-i386.dmg. Now, after File=>smile, nothing happens ... and I mean nothing. Coot stays still as if I wouldn't click any button and there is no error/warning message that gives you a tip about what's the problem (but the window to paste the smile never pop-up). I´m new with coot and the ligand fitting tool and I open Coot by double clicking on the Applications icon or from Phenix. Maybe using scripting would avoid this problems but I´m not good at it …. yet (I'm working on it) I really would really appreciate any help/suggestion you can give me Thx Marian