You can by using an extra argument (True or #t to get the animation) fit_waters(imol, True)
or (fit-waters imol #t) Bernhard > Dear Joe, > > We'll need info from the experts, but as far as I'm aware it's not > possible to get the animation. > > Venlig hilsen/best regards > Folmer Fredslund > > On Feb 5, 2014 7:05 PM, "Joseph Noel" <n...@salk.edu > <mailto:n...@salk.edu>> wrote: > > Dear Folmer! > > Thanks! That is the one I am familiar with but wasn't sure how I > could animate it like for the protein. I guess maybe its not possible. > > Best- > > Joe > > ______________________________________________________________________________________ > Joseph P. Noel, Ph.D. > Arthur and Julie Woodrow Chair > Investigator, Howard Hughes Medical Institute > Professor, The Jack H. Skirball Center for Chemical Biology and > Proteomics > The Salk Institute for Biological Studies > 10010 North Torrey Pines Road > La Jolla, CA 92037 USA > > Phone: (858) 453-4100 extension 1442 > <tel:%28858%29%20453-4100%20extension%201442> > Cell: (858) 349-4700 <tel:%28858%29%20349-4700> > Fax: (858) 597-0855 <tel:%28858%29%20597-0855> > E-mail: n...@salk.edu <mailto:n...@salk.edu> > > Publications & Citations: > http://scholar.google.com/citations?user=xiL1lscAAAAJ > > Homepage Salk: http://www.salk.edu/faculty/noel.html > Homepage HHMI: http://hhmi.org/research/investigators/noel.html > > ______________________________________________________________________________________ > > On Feb 4, 2014, at 10:15 PM, Folmer Fredslund <folm...@gmail.com > <mailto:folm...@gmail.com>> wrote: > >> Dear Joseph, >> >> Yes, it's possible, but not you don't get any real time updates >> like you do for the protein. >> >> Here's a link to the fine manual: >> >> http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs/coot.html#Refine-All-Waters >> >> Venlig hilsen >> Folmer Fredslund >> >> On Feb 5, 2014 12:05 AM, "Joseph Noel" <n...@salk.edu >> <mailto:n...@salk.edu>> wrote: >> >> Is there a way in COOT to automate the real space refine of >> waters - something equivalent to the Extension, All Molecule, >> Fit Protein? >> >> ______________________________________________________________________________________ >> Joseph P. Noel, Ph.D. >> Arthur and Julie Woodrow Chair >> Investigator, Howard Hughes Medical Institute >> Professor, The Jack H. Skirball Center for Chemical Biology >> and Proteomics >> The Salk Institute for Biological Studies >> 10010 North Torrey Pines Road >> La Jolla, CA 92037 USA >> >> Phone: (858) 453-4100 extension 1442 >> <tel:%28858%29%20453-4100%20extension%201442> >> Cell: (858) 349-4700 <tel:%28858%29%20349-4700> >> Fax: (858) 597-0855 <tel:%28858%29%20597-0855> >> E-mail: n...@salk.edu <mailto:n...@salk.edu> >> >> Publications & Citations: >> http://scholar.google.com/citations?user=xiL1lscAAAAJ >> >> Homepage Salk: http://www.salk.edu/faculty/noel.html >> Homepage HHMI: http://hhmi.org/research/investigators/noel.html >> >> ______________________________________________________________________________________ >> > -- *************************************************** Dr. Bernhard Lohkamp Associate Professor/Docent Div. Molecular Structural Biology Dept. of Medical Biochemistry and Biophysics (MBB) Karolinska Institutet S-17177 Stockholm Sweden phone: (+46) 08-52487651 fax: (+46) 08-327626 email: bernhard.lohk...@ki.se
