Hi,

I'm using VcXsrc on WSL2/Ubuntu 18.04. I had a bunch of libraries that I needed 
to manually symlink, but once coot started, I had no problems.


Kind regards,
Erwin



-----Oorspronkelijk bericht-----
Van: Mailing list for users of COOT Crystallographic Software 
<COOT@JISCMAIL.AC.UK> Namens Andrew Purkiss
Verzonden: maandag 23 november 2020 18:39
Aan: COOT@JISCMAIL.AC.UK
Onderwerp: Re: WSL2 installation

I also have this issue with VcXsrc. My alternative is Mobaxterm. This can 
launch its own instance of a WSL Linux distribution or run its own internal 
shell. Running the internal shell gives a flickery Coot, whilst running WSL 
OpenSuse gives a smoother response.

Hope this helps,

Andy




Quoting Johan Hattne <hat...@ucla.edu>:

> We've seen this problem with VcXsrc.  If that's what you're using, you 
> may want to try Xming instead.
>
> // Cheers; Johan
>
> On 2020-11-23 07:19, Johannes Cramer wrote:
>> Dear Paul,dear Erwin,
>>
>> Thank you for your quick reply! It is much appreciated!
>> ccp4mg shows a similar phenotype (see attached picture).
>>
>> export LIBGL_ALWAYS_INDIRECT=1 or 0 does not change anything.  
>> Resizing changes the cropping of the picture, but the coordinates 
>> part of the interface is not in the right place.
>> Also when trying to refine anything in the visible frame I am unable 
>> to pick any atoms.
>>
>> In windows I switched off all post processing for VcXsrv (which I use 
>> for displaying). No change.
>> Can/should I disable optimization in wsl2?
>>
>> Cheers,
>> Johannes
>>
>>
>> image.png
>>
>>
>> Am Mo., 23. Nov. 2020 um 15:32 Uhr schrieb Paul Emsley 
>> <pems...@mrc-lmb.cam.ac.uk <mailto:pems...@mrc-lmb.cam.ac.uk>>:
>>
>>    On 23/11/2020 14:01, Johannes Cramer wrote:
>>     > Dear all,
>>     >
>>     > I recently tried to get my work environment running on
>>    Ubuntu20.04 run through Windows10 with WSL2. So far
>>     > it was a great experience, but I cannot get coot to work properly.
>>     > I installed ccp4 and coot with it.
>>
>>    What about CCP4mg or Chimera?
>>
>>     > When I start coot, the gui starts, there are some warnings (see
>>    below) and I can see all the elements
>>     > however the coordinate space is not completely on the screen (s.
>>    screenshots).
>>
>>    It might be a race condition between the gui and the graphics. Try
>>    adjusting your graphics driver
>>    optimization level.
>>
>>     > When I type ldd /opt/xtal/ccp4-7.1/libexec/coot-bin I get no
>>    missing libraries.
>>
>>    That's good.
>>
>>    Paul.
>>
>>
>> ---------------------------------------------------------------------
>> ---
>>
>> To unsubscribe from the COOT list, click the following link:
>> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1
>> <https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1>
>>
>
> ########################################################################
>
> To unsubscribe from the COOT list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1
>
> This message was issued to members of www.jiscmail.ac.uk/COOT, a  
> mailing list hosted by www.jiscmail.ac.uk, terms & conditions are  
> available at https://www.jiscmail.ac.uk/policyandsecurity/

########################################################################

To unsubscribe from the COOT list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1

This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list 
hosted by www.jiscmail.ac.uk, terms & conditions are available at 
https://www.jiscmail.ac.uk/policyandsecurity/

########################################################################

To unsubscribe from the COOT list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1

This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list 
hosted by www.jiscmail.ac.uk, terms & conditions are available at 
https://www.jiscmail.ac.uk/policyandsecurity/

Reply via email to