Others have a similar issue with Coot & macOS Tahoe... https://discussions.apple.com/thread/256140259?sortBy=rank
Unfortunately, it was not reported on the coot mailing list. > Le 21 sept. 2025 à 09:07, Xavier Brazzolotto <[email protected]> a écrit > : > > Dear coot users, Dear Paul > > I’ve just updated to macOS 26 (Tahoe) > > Unfortunately, I have a bug when launching « old » coot (0.9.8.96 - CCP4-9 > version). > Is anyone experiencing the same issue? > > I’ve tried to reinstall XQuartz and CCP4, but I’m still facing the same error > message. > > The program 'coot-bin' received an X Window System error. > This probably reflects a bug in the program. > The error was 'BadValue (integer parameter out of range for operation)'. > (Details: serial 310 error_code 2 request_code 129 minor_code 2) > (Note to programmers: normally, X errors are reported asynchronously; > that is, you will receive the error a while after causing it. > To debug your program, run it with the --sync command line > option to change this behavior. You can then get a meaningful > backtrace from your debugger if you break on the gdk_x_error() function.) > . ------ Coot crashed - trying to diagnose ----- > Guile 1.8.8 > Copyright (c) 1995, 1996, 1997, 2000, 2001, 2002, 2003, 2004, 2005, 2006, > 2007, 2008 Free Software Foundation > Guile may be distributed under the terms of the GNU General Public Licence; > certain other uses are permitted as well. For details, see the file > `COPYING', which is included in the Guile distribution. > There is no warranty, to the extent permitted by law. > catching the crash log: > coot-exe: "/Applications/ccp4-9/coot_py2/libexec/coot-bin" > /bin/ls > -rwxr-xr-x@ 1 root admin 9356184 Apr 27 19:06 > /Applications/ccp4-9/coot_py2/libexec/coot-bin > coot-version: > /Applications/ccp4-9/coot_py2/libexec/coot-bin > Builder_info: CCP4, Oxfordshire, UK > Enabled: Enhanced-ligand-tools C++-11 Threads Boost-based-thread-pool > Goocanvas GSL LibCurl > Binary type: Darwin-MacOSX-11.7.10-x86_64-python-gtk2 > git commit: 50638a38145722303017be802622d65d83bd7f66 > Builder_info: CCP4, Oxfordshire, UK > [with python 2.7.16 embedded] > [with guile 1.8.8 embedded] > 0.9.8.96 (revision-count 10988) > platform: > /usr/bin/uname > Darwin GRE073859.local 25.0.0 Darwin Kernel Version 25.0.0: Mon Aug 25 > 21:17:51 PDT 2025; root:xnu-12377.1.9~3/RELEASE_ARM64_T6020 x86_64 > core: #f > No core file found. No debugging > > Fortunately, new coot (homebrew) seems to work even if I am still not used to > it yet, and I miss the carbohydrate module. > > Cheers > Xavier ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
