How can I center the view on a specific residue / atom using Python scripting?
Regards, Daniel From: Mailing list for users of COOT Crystallographic Software <[email protected]> on behalf of Daniel Larsson <[email protected]> Reply to: Daniel Larsson <[email protected]> Date: Tuesday, 7 October 2025 at 14:52 To: <[email protected]> Subject: Re: setting the refinement map using Python scripting How about setting the map weight? There are functions for estimating and getting the current weight, but I cannot figure out how to set a new map weight. Regards, Daniel From: Mailing list for users of COOT Crystallographic Software <[email protected]> on behalf of Daniel Larsson <[email protected]> Reply to: Daniel Larsson <[email protected]> Date: Tuesday, 7 October 2025 at 09:58 To: <[email protected]> Subject: Re: setting the refinement map using Python scripting Thanks for the quick reply! /Daniel From: Paul Emsley <[email protected]> Date: Tuesday, 7 October 2025 at 09:49 To: Daniel Larsson <[email protected]> Subject: Re: setting the refinement map using Python scripting On 07/10/2025 08:37, Daniel Larsson wrote: -- Hi all, How does one set the map to refine against using Python in Coot 9.8? Normally, one clicks the “Map” icon in the sidebar, which opens the “Select Map for Fitting” dialogue. set_imol_refinement_map(imol_map) where imol_map is the return value of reading a ccp4 map or creating a map from an mtz file. VARNING: Klicka inte på länkar och öppna inte bilagor om du inte känner igen avsändaren och vet att innehållet är säkert. CAUTION: Do not click on links or open attachments unless you recognise the sender and know the content is safe. När du har kontakt med oss på Uppsala universitet med e-post så innebär det att vi behandlar dina personuppgifter. För att läsa mer om hur vi gör det kan du läsa här: http://www.uu.se/om-uu/dataskydd-personuppgifter/ E-mailing Uppsala University means that we will process your personal data. For more information on how this is performed, please read here: http://www.uu.se/en/about-uu/data-protection-policy ________________________________ To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 VARNING: Klicka inte på länkar och öppna inte bilagor om du inte känner igen avsändaren och vet att innehållet är säkert. CAUTION: Do not click on links or open attachments unless you recognise the sender and know the content is safe. ________________________________ To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 VARNING: Klicka inte på länkar och öppna inte bilagor om du inte känner igen avsändaren och vet att innehållet är säkert. CAUTION: Do not click on links or open attachments unless you recognise the sender and know the content is safe. ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
