This distribution has been tested as part of the cpan-testers effort to test as many new uploads to CPAN as possible. See http://testers.cpan.org/
Please cc any replies to [email protected] to keep other test volunteers informed and to prevent any duplicate effort. -- Dear ALEXMASS, This is a computer-generated error report created automatically by CPANPLUS, version 0.0562. Testers personal comments may appear at the end of this report. Thank you for uploading your work to CPAN. However, it appears that there were some problems testing your distribution. TEST RESULTS: Below is the error stack from stage 'make test': [CP_MSG] [Sat Oct 22 14:30:48 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/A/AL/ALEXMASS/bioinfo/InSilicoSpectro-1.2.5.tar.gz' [CP_MSG] [Sat Oct 22 14:30:57 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/A/AL/ALEXMASS/bioinfo/CHECKSUMS' [CP_MSG] [Sat Oct 22 14:30:58 2005] Checksum matches for 'InSilicoSpectro-1.2.5.tar.gz' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/XML/' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/XML/144.pidres.xml' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/XML/a.indexMaker.xml' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/XML/SaxIndexMaker.t' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/XML/testSaxIndexMaker.pl' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/Utils.t' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/a.txt' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/a.zip' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/b.txt' [CP_MSG] [Sat Oct 22 14:30:59 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/c.txt' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/a.fasta.gz' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/a.indexMaker.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/testFiles.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Utils/testIO.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/test1' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/test2' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/calHodges.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/paramPI.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/fitip.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/paramRT.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/fitkrok.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/406.dat' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/coef.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/expdata' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/Petritis.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/rtset.dtd' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/rtset.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/Hodges.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/krok.dat' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/fitguo.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/pidata.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/nnet.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/piset.dtd' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/piset.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/fitpet.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/data/calPetritis.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testMSMSOutLegend.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcDigest.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testMSMSOutLatex.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/meuh.pkl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcDigestOOP.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/getIonIntensities.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testPeptide.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testAASequence.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcPMFMatchOOP.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcMatch.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcMatchOOP.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCleavEnzyme.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testMSMSOutText.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/insilicodef.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testModRes.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/ionStat.R' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcFragOOP.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/InSilico.t' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/examples_rt_pi' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testSequence.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcVarpept.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcFrag.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/listfiles' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testMSMSOutHtml.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testHodges.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testMSMSOutPlot.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testIsoelPoint.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testPetritis.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/InSilico/testCalcPMFMatch.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/a.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/testPeakDescriptor.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/testSpectra.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/myo_ms2_1.04.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/Spectra.t' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/testExpSpectrum.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/t/Spectra/166.dta' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Utils/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Utils/XML/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Utils/XML/SaxIndexMaker.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Utils/Files.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Utils/WorkDir.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Utils/io.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/MSMSOutput.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/PMFMatch.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/TermIonSeries.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/Peptide.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/CleavEnzyme.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/IsoelPoint.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/RetentionTimer.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/MassCalculator.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/IonSeries.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/MSMSTheoSpectrum.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/RetentionTimer/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/RetentionTimer/Petritis.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/RetentionTimer/Hodges.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/RetentionTimer/hodges_coef.xml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/AASequence.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/ModRes.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/Sequence.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/ExpCalibrator.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/InSilico/InternIonSeries.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/MSSpectra.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/ExpSpectrum.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/PeakDescriptor.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/MSRun.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/PhenyxPeakDescriptor.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/MSMSCmpd.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/lib/InSilicoSpectro/Spectra/MSMSSpectra.pm' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/README' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/scripts/' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/scripts/convertSpectra.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/scripts/importResid.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/scripts/indexXml.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/scripts/computePI.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/scripts/computeRT.pl' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/Makefile.PL' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro-1.2.5/META.yml' [CP_MSG] [Sat Oct 22 14:31:00 2005] Extracted 'InSilicoSpectro' to '/home/njh/.cpanplus/5.8.6/build/InSilicoSpectro-1.2.5' [CP_MSG] [Sat Oct 22 14:31:01 2005] Warning: prerequisite File::Find::Rule 0 not found. Writing Makefile for InSilicoSpectro [CP_MSG] [Sat Oct 22 14:31:01 2005] Module 'InSilicoSpectro' requires 'File::Find::Rule' version '0' to be installed [CP_MSG] [Sat Oct 22 14:31:01 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/R/RC/RCLAMP/File-Find-Rule-0.28.tar.gz' [CP_MSG] [Sat Oct 22 14:31:04 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/R/RC/RCLAMP/CHECKSUMS' [CP_MSG] [Sat Oct 22 14:31:05 2005] Checksum matches for 'File-Find-Rule-0.28.tar.gz' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/lib/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/lib/File/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/lib/File/Find/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/lib/File/Find/Rule/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/lib/File/Find/Rule/Test/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/lib/File/Find/Rule/Test/ATeam.pm' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/foobar' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/findrule.t' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/t/File-Find-Rule.t' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/lib/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/lib/File/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/lib/File/Find/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/lib/File/Find/Rule/' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/lib/File/Find/Rule/Procedural.pod' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/lib/File/Find/Rule/Extending.pod' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/lib/File/Find/Rule.pm' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/README' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/Changes' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/Build.PL' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/findrule' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/Makefile.PL' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/META.yml' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File-Find-Rule-0.28/MANIFEST' [CP_MSG] [Sat Oct 22 14:31:05 2005] Extracted 'File::Find::Rule' to '/home/njh/.cpanplus/5.8.6/build/File-Find-Rule-0.28' [CP_MSG] [Sat Oct 22 14:31:06 2005] Checking if your kit is complete... Looks good Warning: prerequisite Number::Compare 0 not found. Warning: prerequisite Text::Glob 0 not found. Writing Makefile for File::Find::Rule [CP_MSG] [Sat Oct 22 14:31:06 2005] Module 'File::Find::Rule' requires 'Number::Compare' version '0' to be installed [CP_MSG] [Sat Oct 22 14:31:06 2005] Module 'File::Find::Rule' requires 'Text::Glob' version '0' to be installed [CP_MSG] [Sat Oct 22 14:31:06 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/R/RC/RCLAMP/Number-Compare-0.01.tar.gz' [CP_MSG] [Sat Oct 22 14:31:07 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/R/RC/RCLAMP/CHECKSUMS' [CP_MSG] [Sat Oct 22 14:31:07 2005] Checksum matches for 'Number-Compare-0.01.tar.gz' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/MANIFEST' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/t/' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/t/Number-Compare.t' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/MANIFEST.SKIP' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/Compare.pm' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/Changes' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number-Compare-0.01/Makefile.PL' [CP_MSG] [Sat Oct 22 14:31:07 2005] Extracted 'Number::Compare' to '/home/njh/.cpanplus/5.8.6/build/Number-Compare-0.01' [CP_MSG] [Sat Oct 22 14:31:07 2005] Checking if your kit is complete... Looks good Writing Makefile for Number::Compare [CP_MSG] [Sat Oct 22 14:31:10 2005] cp Compare.pm blib/lib/Number/Compare.pm Manifying blib/man3/Number::Compare.3pm [CP_MSG] [Sat Oct 22 14:31:11 2005] MAKE TEST passed: PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/Number-Compare....ok All tests successful. Files=1, Tests=24, 0 wallclock secs ( 0.30 cusr + 0.26 csys = 0.56 CPU) [CP_MSG] [Sat Oct 22 14:31:12 2005] Successfully sent 'pass' report for 'Number-Compare-0.01' [CP_MSG] [Sat Oct 22 14:31:12 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/R/RC/RCLAMP/Text-Glob-0.06.tar.gz' [CP_MSG] [Sat Oct 22 14:31:12 2005] Trying to get 'ftp://ftp.mirror.ac.uk/sites/ftp.funet.fi/pub/languages/perl/CPAN/authors/id/R/RC/RCLAMP/CHECKSUMS' [CP_MSG] [Sat Oct 22 14:31:12 2005] Checksum matches for 'Text-Glob-0.06.tar.gz' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/t/' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/t/Text-Glob.t' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/MANIFEST' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/META.yml' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/lib/' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/lib/Text/' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/lib/Text/Glob.pm' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/Changes' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/Build.PL' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/Makefile.PL' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text-Glob-0.06/README' [CP_MSG] [Sat Oct 22 14:31:12 2005] Extracted 'Text::Glob' to '/home/njh/.cpanplus/5.8.6/build/Text-Glob-0.06' [CP_MSG] [Sat Oct 22 14:31:13 2005] Checking if your kit is complete... Looks good Writing Makefile for Text::Glob [CP_MSG] [Sat Oct 22 14:31:16 2005] cp lib/Text/Glob.pm blib/lib/Text/Glob.pm Manifying blib/man3/Text::Glob.3pm [CP_MSG] [Sat Oct 22 14:31:17 2005] MAKE TEST passed: PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/Text-Glob....ok All tests successful. Files=1, Tests=41, 0 wallclock secs ( 0.37 cusr + 0.26 csys = 0.63 CPU) [CP_MSG] [Sat Oct 22 14:31:17 2005] Successfully sent 'pass' report for 'Text-Glob-0.06' [CP_MSG] [Sat Oct 22 14:31:22 2005] cp lib/File/Find/Rule.pm blib/lib/File/Find/Rule.pm cp lib/File/Find/Rule/Extending.pod blib/lib/File/Find/Rule/Extending.pod cp lib/File/Find/Rule/Procedural.pod blib/lib/File/Find/Rule/Procedural.pod cp findrule blib/script/findrule /usr/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/findrule Manifying blib/man1/findrule.1 Manifying blib/man3/File::Find::Rule.3pm Manifying blib/man3/File::Find::Rule::Extending.3pm Manifying blib/man3/File::Find::Rule::Procedural.3pm [CP_MSG] [Sat Oct 22 14:31:33 2005] MAKE TEST passed: PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/File-Find-Rule....ok t/findrule..........ok All tests successful. Files=2, Tests=44, 10 wallclock secs ( 5.26 cusr + 4.56 csys = 9.82 CPU) [CP_MSG] [Sat Oct 22 14:31:33 2005] Successfully sent 'pass' report for 'File-Find-Rule-0.28' [CP_MSG] [Sat Oct 22 14:31:37 2005] cp lib/InSilicoSpectro/InSilico/RetentionTimer/hodges_coef.xml blib/lib/InSilicoSpectro/InSilico/RetentionTimer/hodges_coef.xml cp lib/InSilicoSpectro/InSilico/RetentionTimer/Hodges.pm blib/lib/InSilicoSpectro/InSilico/RetentionTimer/Hodges.pm cp lib/InSilicoSpectro/InSilico/MSMSTheoSpectrum.pm blib/lib/InSilicoSpectro/InSilico/MSMSTheoSpectrum.pm cp lib/InSilicoSpectro/Spectra/MSMSSpectra.pm blib/lib/InSilicoSpectro/Spectra/MSMSSpectra.pm cp lib/InSilicoSpectro/InSilico/Sequence.pm blib/lib/InSilicoSpectro/InSilico/Sequence.pm cp lib/InSilicoSpectro/InSilico/InternIonSeries.pm blib/lib/InSilicoSpectro/InSilico/InternIonSeries.pm cp lib/InSilicoSpectro/InSilico/ModRes.pm blib/lib/InSilicoSpectro/InSilico/ModRes.pm cp lib/InSilicoSpectro.pm blib/lib/InSilicoSpectro.pm cp lib/InSilicoSpectro/InSilico/TermIonSeries.pm blib/lib/InSilicoSpectro/InSilico/TermIonSeries.pm cp lib/InSilicoSpectro/InSilico/RetentionTimer/Petritis.pm blib/lib/InSilicoSpectro/InSilico/RetentionTimer/Petritis.pm cp lib/InSilicoSpectro/Spectra/MSSpectra.pm blib/lib/InSilicoSpectro/Spectra/MSSpectra.pm cp lib/InSilicoSpectro/InSilico/MSMSOutput.pm blib/lib/InSilicoSpectro/InSilico/MSMSOutput.pm cp lib/InSilicoSpectro/InSilico/ExpCalibrator.pm blib/lib/InSilicoSpectro/InSilico/ExpCalibrator.pm cp lib/InSilicoSpectro/Utils/WorkDir.pm blib/lib/InSilicoSpectro/Utils/WorkDir.pm cp lib/InSilicoSpectro/Spectra/PhenyxPeakDescriptor.pm blib/lib/InSilicoSpectro/Spectra/PhenyxPeakDescriptor.pm cp lib/InSilicoSpectro/Spectra/MSMSCmpd.pm blib/lib/InSilicoSpectro/Spectra/MSMSCmpd.pm cp lib/InSilicoSpectro/InSilico/CleavEnzyme.pm blib/lib/InSilicoSpectro/InSilico/CleavEnzyme.pm cp lib/InSilicoSpectro/InSilico/PMFMatch.pm blib/lib/InSilicoSpectro/InSilico/PMFMatch.pm cp lib/InSilicoSpectro/Utils/io.pm blib/lib/InSilicoSpectro/Utils/io.pm cp lib/InSilicoSpectro/InSilico/Peptide.pm blib/lib/InSilicoSpectro/InSilico/Peptide.pm cp lib/InSilicoSpectro/Spectra/ExpSpectrum.pm blib/lib/InSilicoSpectro/Spectra/ExpSpectrum.pm cp lib/InSilicoSpectro/InSilico/AASequence.pm blib/lib/InSilicoSpectro/InSilico/AASequence.pm cp lib/InSilicoSpectro/Spectra/MSRun.pm blib/lib/InSilicoSpectro/Spectra/MSRun.pm cp lib/InSilicoSpectro/Utils/Files.pm blib/lib/InSilicoSpectro/Utils/Files.pm cp lib/InSilicoSpectro/InSilico/IonSeries.pm blib/lib/InSilicoSpectro/InSilico/IonSeries.pm cp lib/InSilicoSpectro/InSilico/MassCalculator.pm blib/lib/InSilicoSpectro/InSilico/MassCalculator.pm cp lib/InSilicoSpectro/InSilico/IsoelPoint.pm blib/lib/InSilicoSpectro/InSilico/IsoelPoint.pm cp lib/InSilicoSpectro/InSilico/RetentionTimer.pm blib/lib/InSilicoSpectro/InSilico/RetentionTimer.pm cp lib/InSilicoSpectro/Utils/XML/SaxIndexMaker.pm blib/lib/InSilicoSpectro/Utils/XML/SaxIndexMaker.pm cp lib/InSilicoSpectro/Spectra/PeakDescriptor.pm blib/lib/InSilicoSpectro/Spectra/PeakDescriptor.pm Manifying blib/man3/InSilicoSpectro::InSilico::RetentionTimer::Hodges.3pm Manifying blib/man3/InSilicoSpectro::InSilico::MSMSTheoSpectrum.3pm Manifying blib/man3/InSilicoSpectro::Spectra::MSMSSpectra.3pm Manifying blib/man3/InSilicoSpectro::InSilico::Sequence.3pm Manifying blib/man3/InSilicoSpectro::InSilico::InternIonSeries.3pm Manifying blib/man3/InSilicoSpectro::InSilico::ModRes.3pm Manifying blib/man3/InSilicoSpectro::InSilico::TermIonSeries.3pm Manifying blib/man3/InSilicoSpectro.3pm Manifying blib/man3/InSilicoSpectro::InSilico::RetentionTimer::Petritis.3pm Manifying blib/man3/InSilicoSpectro::InSilico::ExpCalibrator.3pm Manifying blib/man3/InSilicoSpectro::InSilico::MSMSOutput.3pm Manifying blib/man3/InSilicoSpectro::Spectra::MSSpectra.3pm Manifying blib/man3/InSilicoSpectro::Spectra::PhenyxPeakDescriptor.3pm Manifying blib/man3/InSilicoSpectro::Utils::WorkDir.3pm Manifying blib/man3/InSilicoSpectro::Spectra::MSMSCmpd.3pm Manifying blib/man3/InSilicoSpectro::InSilico::CleavEnzyme.3pm Manifying blib/man3/InSilicoSpectro::Utils::io.3pm Manifying blib/man3/InSilicoSpectro::InSilico::PMFMatch.3pm Manifying blib/man3/InSilicoSpectro::InSilico::Peptide.3pm Manifying blib/man3/InSilicoSpectro::Spectra::ExpSpectrum.3pm Manifying blib/man3/InSilicoSpectro::InSilico::AASequence.3pm Manifying blib/man3/InSilicoSpectro::Spectra::MSRun.3pm Manifying blib/man3/InSilicoSpectro::InSilico::MassCalculator.3pm Manifying blib/man3/InSilicoSpectro::InSilico::IonSeries.3pm Manifying blib/man3/InSilicoSpectro::Utils::Files.3pm Manifying blib/man3/InSilicoSpectro::InSilico::RetentionTimer.3pm Manifying blib/man3/InSilicoSpectro::InSilico::IsoelPoint.3pm Manifying blib/man3/InSilicoSpectro::Utils::XML::SaxIndexMaker.3pm Manifying blib/man3/InSilicoSpectro::Spectra::PeakDescriptor.3pm [CP_ERROR] [Sat Oct 22 14:31:37 2005] MAKE TEST failed: No such file or directory PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/*....t/*.t does not exist FAILED--1 test script could be run, alas--no output ever seen make: *** [test_dynamic] Error 2 PREREQUISITES: Here is a list of prerequisites you specified and versions we managed to load: Archive::Zip 1.16 Compress::Zlib 1.37 Digest::MD5 2.33 File::Find::Rule 0 File::Temp 0.14 Getopt::Long 2.34 MIME::Base64 3.05 XML::Parser 2.34 XML::Twig 3.17 ******************************** NOTE ******************************** The comments above are created mechanically, possibly without manual checking by the sender. As there are many people performing automatic tests on each upload to CPAN, it is likely that you will receive identical messages about the same problem. If you believe that the message is mistaken, please reply to the first one with correction and/or additional informations, and do not take it personally. We appreciate your patience. :) ********************************************************************** Additional comments: This report was machine-generated by CPAN::YACSmoke 0.03. -- Summary of my perl5 (revision 5 version 8 subversion 6) configuration: Platform: osname=linux, osvers=2.4.21-27.0.2.elsmp, archname=i386-linux-thread-multi uname='linux decompose.build.redhat.com 2.4.21-27.0.2.elsmp #1 smp wed jan 12 23:35:44 est 2005 i686 i686 i386 gnulinux ' config_args='-des -Doptimize=-O2 -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -m32 -march=i386 -mtune=pentium4 -fasynchronous-unwind-tables -Dversion=5.8.6 -Dmyhostname=localhost [EMAIL PROTECTED] -Dcc=gcc -Dcf_by=Red Hat, Inc. -Dinstallprefix=/usr -Dprefix=/usr -Darchname=i386-linux -Dvendorprefix=/usr -Dsiteprefix=/usr -Duseshrplib -Dusethreads -Duseithreads -Duselargefiles -Dd_dosuid -Dd_semctl_semun -Di_db -Ui_ndbm -Di_gdbm -Di_shadow -Di_syslog -Dman3ext=3pm -Duseperlio -Dinstallusrbinperl=n -Ubincompat5005 -Uversiononly -Dpager=/usr/bin/less -isr -Dd_gethostent_r_proto -Ud_endhostent_r_proto -Ud_endprotoent_r_proto -Ud_endservent_r_proto -Ud_sethostent_r_proto -Ud_setprotoent_r_proto -Ud_setservent_r_proto -Dinc_version_list=5.8.5 5.8.4 5.8.3' hint=recommended, useposix=true, d_sigaction=define usethreads=define use5005threads=undef useithreads=define usemultiplicity=define useperlio=define d_sfio=undef uselargefiles=define usesocks=undef use64bitint=undef use64bitall=undef uselongdouble=undef usemymalloc=n, bincompat5005=undef Compiler: cc='gcc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -DDEBUGGING -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/gdbm', optimize='-O2 -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -m32 -march=i386 -mtune=pentium4 -fasynchronous-unwind-tables', cppflags='-D_REENTRANT -D_GNU_SOURCE -DDEBUGGING -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/include/gdbm' ccversion='', gccversion='4.0.0 20050516 (Red Hat 4.0.0-6)', gccosandvers='' intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=1234 d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12 ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8 alignbytes=4, prototype=define Linker and Libraries: ld='gcc', ldflags =' -L/usr/local/lib' libpth=/usr/local/lib /lib /usr/lib libs=-lresolv -lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lpthread -lc perllibs=-lresolv -lnsl -ldl -lm -lcrypt -lutil -lpthread -lc libc=/lib/libc-2.3.5.so, so=so, useshrplib=true, libperl=libperl.so gnulibc_version='2.3.5' Dynamic Linking: dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E -Wl,-rpath,/usr/lib/perl5/5.8.6/i386-linux-thread-multi/CORE' cccdlflags='-fPIC', lddlflags='-shared -L/usr/local/lib'
