This distribution has been tested as part of the cpan-testers effort to test as many new uploads to CPAN as possible. See http://testers.cpan.org/
Please cc any replies to [email protected] to keep other test volunteers informed and to prevent any duplicate effort. -- Dear EASR, This is a computer-generated error report created automatically by CPANPLUS, version 0.074. Testers personal comments may appear at the end of this report. Thank you for uploading your work to CPAN. However, it appears that there were some problems testing your distribution. TEST RESULTS: Below is the error stack from stage 'make test': [MSG] [Fri Feb 2 19:52:43 2007] Trying to get 'http://www.cpan.org/authors/id/E/EA/EASR/onto-perl/onto-perl-0.26.tar.gz' [MSG] [Fri Feb 2 19:52:58 2007] Trying to get 'http://www.cpan.org/authors/id/E/EA/EASR/onto-perl/CHECKSUMS' [MSG] [Fri Feb 2 19:53:00 2007] Checksum matches for 'onto-perl-0.26.tar.gz' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/cco-names.html' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/fake_ulo_cco.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/pre_cco_taxa.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/out_cco.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/.DS_Store' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/goa_assoc.txt' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/names_dummy.dmp' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/nodes_dummy.dmp' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/pre_cco.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test1.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test1.xml' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test2.dot' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test2.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test2.owl' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test2.xml' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test_ulo_cco.dot' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/test_ulo_cco.owl' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/ulo_cco.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/pre_cco_core.obo' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/cco_b.ids' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/data/cco_t.ids' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/GoaAssociationSet.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/Def.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/Relationship.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/RelationshipType.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/TermSet.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/DbxrefSet.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/Term.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/NCBIParser.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/SynonymSet.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/Dbxref.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/Ontology.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/Set.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/Synonym.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/OBOParser.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/GoaAssociation.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/t/GoaParser.t' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/Ontology.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/Term.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/Dbxref.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/GoaAssociation.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/Synonym.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/Def.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/Relationship.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Core/RelationshipType.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Parser/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Parser/OBOParser.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Parser/NCBIParser.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Parser/GoaParser.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Util/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Util/DbxrefSet.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Util/SynonymSet.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Util/Set.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Util/GoaAssociationSet.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/CCO/Util/TermSet.pm' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/doc/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/scripts/' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/scripts/go2owl.pl' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/scripts/names.xsl' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/scripts/obo2xml.pl' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/scripts/xml2html.xsl' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/scripts/obo2owl.pl' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/onto-perl.pod' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/MANIFEST' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/INSTALL' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/Makefile.PL' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/Changes' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/README' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/pm_to_blib' [MSG] [Fri Feb 2 19:53:01 2007] Extracted 'onto-perl-latest/Makefile' [MSG] [Fri Feb 2 19:53:02 2007] Extracted 'onto::perl' to '/opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest' [MSG] [Fri Feb 2 19:53:02 2007] Writing Makefile for CCO [MSG] [Fri Feb 2 19:53:02 2007] DEFAULT 'filter_prereqs' HANDLER RETURNING 'sub return value' [MSG] [Fri Feb 2 19:53:03 2007] cp onto-perl.pod blib/lib/onto-perl.pod cp CCO/Core/Dbxref.pm blib/lib/CCO/Core/Dbxref.pm cp CCO/Core/GoaAssociation.pm blib/lib/CCO/Core/GoaAssociation.pm cp CCO/Util/DbxrefSet.pm blib/lib/CCO/Util/DbxrefSet.pm cp CCO/Core/Relationship.pm blib/lib/CCO/Core/Relationship.pm cp CCO/Core/RelationshipType.pm blib/lib/CCO/Core/RelationshipType.pm cp CCO/Util/TermSet.pm blib/lib/CCO/Util/TermSet.pm cp CCO/Util/GoaAssociationSet.pm blib/lib/CCO/Util/GoaAssociationSet.pm cp CCO/Util/SynonymSet.pm blib/lib/CCO/Util/SynonymSet.pm cp CCO/Parser/GoaParser.pm blib/lib/CCO/Parser/GoaParser.pm cp CCO/Core/Ontology.pm blib/lib/CCO/Core/Ontology.pm cp CCO/Core/Synonym.pm blib/lib/CCO/Core/Synonym.pm cp CCO/Core/Def.pm blib/lib/CCO/Core/Def.pm cp CCO/Util/Set.pm blib/lib/CCO/Util/Set.pm cp CCO/Core/Term.pm blib/lib/CCO/Core/Term.pm cp CCO/Parser/NCBIParser.pm blib/lib/CCO/Parser/NCBIParser.pm cp CCO/Parser/OBOParser.pm blib/lib/CCO/Parser/OBOParser.pm Manifying blib/man3/onto-perl.3 Manifying blib/man3/CCO::Core::Dbxref.3 Manifying blib/man3/CCO::Util::DbxrefSet.3 Manifying blib/man3/CCO::Core::GoaAssociation.3 Manifying blib/man3/CCO::Core::Relationship.3 Manifying blib/man3/CCO::Util::TermSet.3 Manifying blib/man3/CCO::Core::RelationshipType.3 Manifying blib/man3/CCO::Util::GoaAssociationSet.3 Manifying blib/man3/CCO::Core::Ontology.3 Manifying blib/man3/CCO::Parser::GoaParser.3 Manifying blib/man3/CCO::Util::SynonymSet.3 Manifying blib/man3/CCO::Core::Def.3 Manifying blib/man3/CCO::Core::Synonym.3 Manifying blib/man3/CCO::Util::Set.3 Manifying blib/man3/CCO::Core::Term.3 Manifying blib/man3/CCO::Parser::NCBIParser.3 Manifying blib/man3/CCO::Parser::OBOParser.3 [ERROR] [Fri Feb 2 19:53:09 2007] MAKE TEST failed: [EMAIL PROTECTED] t/Dbxref...............ok t/DbxrefSet............ok t/Def..................ok t/GoaAssociation.......ok t/GoaAssociationSet....ok t/GoaParser............Can't locate CCO_ID_Term_Map.pm in @INC (@INC contains: /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/arch /home/imacat/lib/perl5 /opt/perl/testers/.cpanplus/5.8.8/build/Number-Compare-0.01/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Number-Compare-0.01/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Number-Compare-0.01/blib /opt/perl/testers/.cpanplus/5.8.8/build/File-Find-Rule-0.30/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/File-Find-Rule-0.30/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/File-Find-Rule-0.30/blib /opt/perl/testers/.cpanplus/5.8.8/build/Data-Compare-0.14/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Data-Compare-0.14/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Data-Compare-0.14/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Name-0.02/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Name-0.02/blib/arch /opt/perl/testers/.cp! anplus/5.8.8/build/Sub-Name-0.02/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Uplevel-0.14/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Uplevel-0.14/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Uplevel-0.14/blib /opt/perl/testers/.cpanplus/5.8.8/build/Test-Exception-0.24/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Test-Exception-0.24/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Test-Exception-0.24/blib /opt/perl/testers/.cpanplus/5.8.8/build/Class-MOP-0.36/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Class-MOP-0.36/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Class-MOP-0.36/blib /opt/perl/testers/.cpanplus/5.8.8/build/Params-Util-0.22/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Params-Util-0.22/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Params-Util-0.22/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Install-0.924/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Install-0.924/blib/arch /opt/perl/testers/.cpanplus/5.8.! 8/build/Sub-Install-0.924/blib /opt/perl/testers/.cpanplus/5.8! .8/build /Data-OptList-0.101/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Data-OptList-0.101/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Data-OptList-0.101/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Exporter-0.972/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Exporter-0.972/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Exporter-0.972/blib /opt/perl/testers/.cpanplus/5.8.8/build/Test-LongString-0.11/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Test-LongString-0.11/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Test-LongString-0.11/blib /opt/perl/testers/.cpanplus/5.8.8/build/Moose-0.17/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Moose-0.17/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Moose-0.17/blib /opt/perl/testers/.cpanplus/5.8.8/build/Set-Object-1.19/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Set-Object-1.19/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Set-Object-1.19/blib /opt/perl/testers/.cpanplus/5.8.8/build/Test-use-o! k-0.02/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Test-use-ok-0.02/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Test-use-ok-0.02/blib /opt/perl/testers/.cpanplus/5.8.8/build/Class-Workflow-0.04/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Class-Workflow-0.04/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Class-Workflow-0.04/blib /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib /opt/perl/testers/lib/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/5.8.8 /opt/perl/testers/lib/site_perl/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.8.8 /opt/perl/testers/lib/site_perl/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.8.8 /opt/perl/testers/lib/site_perl . /opt/perl/testers/lib/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/5.8.8 /opt/perl/testers/lib/site_perl/5.8.8/x! 86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.! 8.8 /opt /perl/testers/lib/site_perl . ../cco/scripts/pipeline) at /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/lib/CCO/Parser/GoaParser.pm line 25. BEGIN failed--compilation aborted at /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/lib/CCO/Parser/GoaParser.pm line 25. Compilation failed in require at t/GoaParser.t line 15. BEGIN failed--compilation aborted at t/GoaParser.t line 15. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-5 Failed 5/5 tests, 0.00% okay t/NCBIParser...........Can't locate CCO_ID_Term_Map.pm in @INC (@INC contains: /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/arch /home/imacat/lib/perl5 /opt/perl/testers/.cpanplus/5.8.8/build/Number-Compare-0.01/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Number-Compare-0.01/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Number-Compare-0.01/blib /opt/perl/testers/.cpanplus/5.8.8/build/File-Find-Rule-0.30/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/File-Find-Rule-0.30/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/File-Find-Rule-0.30/blib /opt/perl/testers/.cpanplus/5.8.8/build/Data-Compare-0.14/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Data-Compare-0.14/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Data-Compare-0.14/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Name-0.02/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Name-0.02/blib/arch /opt/perl/testers/.cp! anplus/5.8.8/build/Sub-Name-0.02/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Uplevel-0.14/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Uplevel-0.14/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Uplevel-0.14/blib /opt/perl/testers/.cpanplus/5.8.8/build/Test-Exception-0.24/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Test-Exception-0.24/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Test-Exception-0.24/blib /opt/perl/testers/.cpanplus/5.8.8/build/Class-MOP-0.36/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Class-MOP-0.36/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Class-MOP-0.36/blib /opt/perl/testers/.cpanplus/5.8.8/build/Params-Util-0.22/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Params-Util-0.22/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Params-Util-0.22/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Install-0.924/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Install-0.924/blib/arch /opt/perl/testers/.cpanplus/5.8.! 8/build/Sub-Install-0.924/blib /opt/perl/testers/.cpanplus/5.8! .8/build /Data-OptList-0.101/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Data-OptList-0.101/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Data-OptList-0.101/blib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Exporter-0.972/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Exporter-0.972/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Sub-Exporter-0.972/blib /opt/perl/testers/.cpanplus/5.8.8/build/Test-LongString-0.11/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Test-LongString-0.11/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Test-LongString-0.11/blib /opt/perl/testers/.cpanplus/5.8.8/build/Moose-0.17/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Moose-0.17/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Moose-0.17/blib /opt/perl/testers/.cpanplus/5.8.8/build/Set-Object-1.19/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Set-Object-1.19/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Set-Object-1.19/blib /opt/perl/testers/.cpanplus/5.8.8/build/Test-use-o! k-0.02/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Test-use-ok-0.02/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Test-use-ok-0.02/blib /opt/perl/testers/.cpanplus/5.8.8/build/Class-Workflow-0.04/blib/lib /opt/perl/testers/.cpanplus/5.8.8/build/Class-Workflow-0.04/blib/arch /opt/perl/testers/.cpanplus/5.8.8/build/Class-Workflow-0.04/blib /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib /opt/perl/testers/lib/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/5.8.8 /opt/perl/testers/lib/site_perl/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.8.8 /opt/perl/testers/lib/site_perl/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.8.8 /opt/perl/testers/lib/site_perl . /opt/perl/testers/lib/5.8.8/x86_64-linux-thread-multi-ld /opt/perl/testers/lib/5.8.8 /opt/perl/testers/lib/site_perl/5.8.8/x! 86_64-linux-thread-multi-ld /opt/perl/testers/lib/site_perl/5.! 8.8 /opt /perl/testers/lib/site_perl . ../cco/scripts/pipeline) at /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/lib/CCO/Parser/NCBIParser.pm line 21. BEGIN failed--compilation aborted at /opt/perl/testers/.cpanplus/5.8.8/build/onto-perl-latest/blib/lib/CCO/Parser/NCBIParser.pm line 21. Compilation failed in require at t/NCBIParser.t line 17. BEGIN failed--compilation aborted at t/NCBIParser.t line 17. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-3 Failed 3/3 tests, 0.00% okay t/OBOParser............ok t/Ontology.............ok t/Relationship.........ok t/RelationshipType.....ok t/Set..................ok t/Synonym..............ok t/SynonymSet...........ok t/Term.................ok t/TermSet..............ok Failed Test Stat Wstat Total Fail List of Failed ------------------------------------------------------------------------------- t/GoaParser.t 2 512 5 10 1-5 t/NCBIParser.t 2 512 3 6 1-3 Failed 2/16 test scripts. 8/488 subtests failed. Files=16, Tests=488, 6 wallclock secs ( 5.67 cusr + 0.14 csys = 5.81 CPU) Failed 2/16 test programs. 8/488 subtests failed. make: *** [test_dynamic] Error 255 MISSING PREREQUISITES: It was observed that the test suite seem to fail without these modules: CCO_ID_Term_Map As such, adding the prerequisite module(s) to 'PREREQ_PM' in your Makefile.PL should solve this problem. For example: WriteMakefile( AUTHOR => 'EASR ([EMAIL PROTECTED])', ... # other information PREREQ_PM => { 'CCO_ID_Term_Map' => '0', # or a minimum working version } ); If you are interested in making a more flexible Makefile.PL that can probe for missing dependencies and install them, ExtUtils::AutoInstall at <http://search.cpan.org/dist/ExtUtils-AutoInstall/> may be worth a look. Thanks! :-) ******************************** NOTE ******************************** The comments above are created mechanically, possibly without manual checking by the sender. As there are many people performing automatic tests on each upload to CPAN, it is likely that you will receive identical messages about the same problem. If you believe that the message is mistaken, please reply to the first one with correction and/or additional informations, and do not take it personally. We appreciate your patience. :) ********************************************************************** Additional comments: This report was machine-generated by CPAN::YACSmoke 0.03. -- Summary of my perl5 (revision 5 version 8 subversion 8) configuration: Platform: osname=linux, osvers=2.6.16.14, archname=x86_64-linux-thread-multi-ld uname='linux rinse 2.6.16.14 #1 smp mon may 8 23:44:32 cst 2006 x86_64 gnulinux ' config_args='-d -Dusethreads -Dcc=gcc -Duselongdouble -Doptimize=-g -O3 -Duse64bitint -Duse64bitall -Dprefix=/opt/perl/testers -Dd_dosuid -Dinc_version_list=none -Acccdlflags=-fPIC -Duseshrplib=true [EMAIL PROTECTED]' hint=recommended, useposix=true, d_sigaction=define usethreads=define use5005threads=undef useithreads=define usemultiplicity=define useperlio=define d_sfio=undef uselargefiles=define usesocks=undef use64bitint=define use64bitall=define uselongdouble=define usemymalloc=n, bincompat5005=undef Compiler: cc='gcc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -DDEBUGGING -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64', optimize='-g -O3', cppflags='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -DDEBUGGING -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include' ccversion='', gccversion='3.4.4 20050314 (prerelease) (Debian 3.4.3-13)', gccosandvers='' intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678 d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16 ivtype='long', ivsize=8, nvtype='long double', nvsize=16, Off_t='off_t', lseeksize=8 alignbytes=16, prototype=define Linker and Libraries: ld='gcc', ldflags =' -L/usr/local/lib' libpth=/usr/local/lib /lib /usr/lib libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lpthread -lc perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc libc=/lib/libc-2.3.2.so, so=so, useshrplib=true, libperl=libperl.so gnulibc_version='2.3.2' Dynamic Linking: dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E -Wl,-rpath,/opt/perl/testers/lib/5.8.8/x86_64-linux-thread-multi-ld/CORE' cccdlflags=' -fPIC', lddlflags='-shared -L/usr/local/lib'
