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--
Dear Chris Mungall,
This is a computer-generated test report for go-perl-0.07, created
automatically by CPAN::Reporter, version 0.99_10, and sent to the CPAN
Testers mailing list. If you have received this email directly, it is
because the person testing your distribution chose to send a copy to your
CPAN email address; there may be a delay before the official report is
received and processed by CPAN Testers.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Prerequisites
* Environment and other context
* Test output
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
[none provided]
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------ ---- --------
Data::Dumper 0 2.121_14
Data::Stag 0.07 0.10
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
LANG = C
PATH =
/usr/lib/ccache:/home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
PERL5LIB =
PERL5_CPANPLUS_IS_RUNNING = 5141
PERL5_CPAN_IS_RUNNING = 5141
PERL_MM_USE_DEFAULT = 1
SHELL = /usr/bin/zsh
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
Perl: $^X = /home/src/perl/repoperls/installed-perls/perl/pz4RKIn/[EMAIL
PROTECTED]/bin/perl
UID: $< = 1005
EUID: $> = 1005
GID: $( = 1005 1005
EGID: $) = 1005 1005
Perl module toolchain versions installed:
Module Have
------------------- ---------
CPAN 1.9102
Cwd 3.25
ExtUtils::CBuilder 0.19
ExtUtils::Command 1.13
ExtUtils::Install 1.41_04
ExtUtils::MakeMaker 6.36_01
ExtUtils::Manifest 1.51_01
ExtUtils::ParseXS 2.18
File::Spec 3.25
Module::Build 0.2808_01
Module::Signature 0.55
Test::Harness 2.64
Test::More 0.70
YAML 0.65
YAML::Syck 0.97
version 0.7203
------------------------------
TEST OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 /home/src/perl/repoperls/installed-perls/perl/pz4RKIn/[EMAIL
PROTECTED]/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib',
'blib/arch')" t/*.t
t/t010build..............ok
t/t020paths..............ok
t/t030detecterror........ok
t/t050oboformat..........ok
t/t060oboformat2.........ok
t/t070parseannot2obj.....ok
t/t080gofmt2.............ok
t/t100roundtrip..........ok
t/t110basic..............Use of uninitialized value $txt in substitution (s///)
at GO/Parsers/obo_text_parser.pm line 472, <GEN0> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 473, <GEN0> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 504, <GEN0> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 472, <GEN0> line 82.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 473, <GEN0> line 82.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 504, <GEN0> line 82.
ok
t/t130relations..........Use of uninitialized value $txt in substitution (s///)
at GO/Parsers/obo_text_parser.pm line 472, <GEN0> line 19.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 473, <GEN0> line 19.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 504, <GEN0> line 19.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 472, <GEN1> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 473, <GEN1> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 504, <GEN1> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 472, <GEN1> line 82.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 473, <GEN1> line 82.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 504, <GEN1> line 82.
ok
t/t140subgraph...........ok
t/t150xref...............ok
t/t160logicaldef.........ok
t/t170chadoxml...........ok
t/t180ncbi_taxonomy......ok
t/t200impliedlinks.......ok
t/t210cache..............Use of uninitialized value $txt in substitution (s///)
at GO/Parsers/obo_text_parser.pm line 472, <GEN0> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 473, <GEN0> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 504, <GEN0> line 81.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 472, <GEN0> line 82.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 473, <GEN0> line 82.
Use of uninitialized value $txt in substitution (s///) at
GO/Parsers/obo_text_parser.pm line 504, <GEN0> line 82.
ok
t/t220xref_esc...........ok
t/t230term_expression....ok
t/t240ga2obj.............ok
All tests successful.
Files=20, Tests=119, 48 wallclock secs (24.04 cusr + 0.74 csys = 24.78 CPU)
--
Summary of my perl5 (revision 5 version 10 subversion 0) configuration:
Platform:
osname=linux, osvers=2.6.22-1-k7, archname=i686-linux-64int
uname='linux k75 2.6.22-1-k7 #1 smp sun jul 29 15:15:55 utc 2007 i686
gnulinux '
config_args='-Dprefix=/home/src/perl/repoperls/installed-perls/perl/pz4RKIn/[EMAIL
PROTECTED] -Dinstallusrbinperl=n -Uversiononly -Doptimize=-g -des
-Duse64bitint -Dusedevel -Duserelocatableinc'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=undef, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-DDEBUGGING -fno-strict-aliasing -pipe
-I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-g',
cppflags='-DDEBUGGING -fno-strict-aliasing -pipe -I/usr/local/include'
ccversion='', gccversion='4.1.2 20061115 (prerelease) (Debian 4.1.1-21)',
gccosandvers=''
intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
ivtype='long long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t',
lseeksize=8
alignbytes=4, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -L/usr/local/lib'
libpth=/usr/local/lib /lib /usr/lib /usr/lib64
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
libc=/lib/libc-2.6.1.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.6.1'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -g -L/usr/local/lib'
