I ran into an issue doing a build to build upgrade from I20131119-0800 or earlier to the latest I-Build. The symptom is that many fragments may end up not resolved. This is a side effect of a fix put in for bug https://bugs.eclipse.org/bugs/show_bug.cgi?id=421706
I have fixed the issue for the next I-Build. In the mean time, if you are doing build to build upgrades then the work around is to issue is to start eclipse with the -clean option after updating in order to force regeneration of the persisted bundle metadata. Sorry for the inconvienence. Tom
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