Can't install netCDF4

[Edvardsen Kåre]

I need to install the netCDF4 package which is the Python/numpy
interface to netCDF
(see http://code.google.com/p/netcdf4-python/ )

I've tried to install version 0.9.4 and later, but they all give pretty
much the same error message (attached).
For me this looks like it is not ment to work under cygwin, but if
anyone can help me out, I would really appreciate it.

Reards,
Kåre


HDF5_DIR environment variable not set, checking some standard locations ..
checking /home/kare ...
checking /usr/local ...
checking /sw ...
checking /opt ...
checking /opt/local ...
checking /usr ...
HDF5 found in /usr

NETCDF4_DIR environment variable not set, checking standard locations.. 
checking /home/kare ...
checking /usr/local ...
checking /sw ...
checking /opt ...
checking /opt/local ...
checking /usr ...
netCDF4 found in /usr
running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler 
options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler 
options
running build_src
build_src
building py_modules sources
building extension "netCDF4" sources
build_src: building npy-pkg config files
running build_py
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
building 'netCDF4' extension
compiling C sources
C compiler: gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall 
-Wstrict-prototypes

compile options: '-I/usr/include -I/usr/include 
-I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 
-c'
gcc: netCDF4.c
netCDF4.c: In function ‘__pyx_pf_7netCDF4_6getlibversion’:
netCDF4.c:2513:21: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att_names’:
netCDF4.c:8696:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:8764:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att’:
netCDF4.c:8928:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:8956:10: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:8956:10: note: each undeclared identifier is reported only once for 
each function it appears in
netCDF4.c:9019:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:9334:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_format’:
netCDF4.c:9687:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__set_att’:
netCDF4.c:10221:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:10404:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_types’:
netCDF4.c:10494:3: warning: implicit declaration of function 
‘nc_inq_typeids’
netCDF4.c:10513:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:10612:7: warning: implicit declaration of function 
‘nc_inq_user_type’
netCDF4.c:10631:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:10666:14: error: ‘NC_COMPOUND’ undeclared (first use in this 
function)
netCDF4.c:10802:14: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_dims’:
netCDF4.c:11034:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11106:7: warning: implicit declaration of function ‘nc_inq_dimids’
netCDF4.c:11125:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11209:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_grps’:
netCDF4.c:11353:3: warning: implicit declaration of function ‘nc_inq_grps’
netCDF4.c:11372:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11456:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11492:7: warning: implicit declaration of function 
‘nc_inq_grpname’
netCDF4.c:11511:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_vars’:
netCDF4.c:11707:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11788:7: warning: implicit declaration of function ‘nc_inq_varids’
netCDF4.c:11807:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11900:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11963:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:12012:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:12093:41: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:12147:20: error: ‘NC_COMPOUND’ undeclared (first use in this 
function)
netCDF4.c:12245:20: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c:12411:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:12460:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset___init__’:
netCDF4.c:13119:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_1close’:
netCDF4.c:13376:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_2sync’:
netCDF4.c:13453:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_5set_fill_on’:
netCDF4.c:13589:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_6set_fill_off’:
netCDF4.c:13667:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_8renameDimension’:
netCDF4.c:13994:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_12renameVariable’:
netCDF4.c:14884:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_18delncattr’:
netCDF4.c:15447:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_5Group___init__’:
netCDF4.c:16522:5: warning: implicit declaration of function ‘nc_def_grp’
netCDF4.c:16541:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:16603:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension___init__’:
netCDF4.c:17093:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_1__len__’:
netCDF4.c:17173:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_2isunlimited’:
netCDF4.c:17265:5: warning: implicit declaration of function 
‘nc_inq_unlimdims’
netCDF4.c:17284:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:17365:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable___init__’:
netCDF4.c:18689:7: warning: implicit declaration of function 
‘nc_get_var_chunk_cache’
netCDF4.c:18708:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:18744:7: warning: implicit declaration of function 
‘nc_set_var_chunk_cache’
netCDF4.c:18763:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:18827:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:18916:11: warning: implicit declaration of function 
‘nc_def_var_deflate’
netCDF4.c:18974:22: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19013:9: warning: implicit declaration of function 
‘nc_def_var_fletcher32’
netCDF4.c:19057:22: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19105:33: error: ‘NC_CONTIGUOUS’ undeclared (first use in this 
function)
netCDF4.c:19143:33: error: ‘NC_CHUNKED’ undeclared (first use in this 
function)
netCDF4.c:19280:11: warning: implicit declaration of function 
‘nc_def_var_chunking’
netCDF4.c:19333:24: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19378:9: warning: implicit declaration of function 
‘nc_def_var_endian’
netCDF4.c:19378:166: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in 
this function)
netCDF4.c:19402:166: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this 
function)
netCDF4.c:19487:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19543:9: warning: implicit declaration of function 
‘nc_def_var_fill’
netCDF4.c:19587:22: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19847:16: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_1_getdims’:
netCDF4.c:19971:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:20016:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:20082:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_6delncattr’:
netCDF4.c:20886:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_7filters’:
netCDF4.c:21013:3: warning: implicit declaration of function 
‘nc_inq_var_deflate’
netCDF4.c:21032:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:21058:3: warning: implicit declaration of function 
‘nc_inq_var_fletcher32’
netCDF4.c:21077:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_8endian’:
netCDF4.c:21270:3: warning: implicit declaration of function 
‘nc_inq_var_endian’
netCDF4.c:21289:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:21324:10: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in this 
function)
netCDF4.c:21346:10: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this 
function)
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_9chunking’:
netCDF4.c:21469:3: warning: implicit declaration of function 
‘nc_inq_var_chunking’
netCDF4.c:21488:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_10get_var_chunk_cache’:
netCDF4.c:21670:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_11set_var_chunk_cache’:
netCDF4.c:22020:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_17_assign_vlen’:
netCDF4.c:23950:3: error: ‘nc_vlen_t’ undeclared (first use in this 
function)
netCDF4.c:23950:14: error: ‘__pyx_v_vldata’ undeclared (first use in this 
function)
netCDF4.c:24632:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:24733:35: error: expected expression before ‘)’ token
netCDF4.c:24779:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_23_put’:
netCDF4.c:26223:3: error: ‘nc_vlen_t’ undeclared (first use in this 
function)
netCDF4.c:26223:14: error: ‘__pyx_v_vldata’ undeclared (first use in this 
function)
netCDF4.c:26798:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:27065:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:27112:37: error: expected expression before ‘)’ token
netCDF4.c:27304:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_24_get’:
netCDF4.c:27378:3: error: ‘nc_vlen_t’ undeclared (first use in this 
function)
netCDF4.c:27378:14: error: ‘__pyx_v_vldata’ undeclared (first use in this 
function)
netCDF4.c:27909:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:28103:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:28200:37: error: expected expression before ‘)’ token
netCDF4.c:28277:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_compound’:
netCDF4.c:29404:3: warning: implicit declaration of function 
‘nc_def_compound’
netCDF4.c:29423:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:29862:7: warning: implicit declaration of function 
‘nc_insert_compound’
netCDF4.c:29881:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:29993:21: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:30199:11: warning: implicit declaration of function 
‘nc_insert_array_compound’
netCDF4.c:30218:23: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:30320:23: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_compound’:
netCDF4.c:30926:3: warning: implicit declaration of function 
‘nc_inq_compound’
netCDF4.c:30945:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:31059:5: warning: implicit declaration of function 
‘nc_inq_compound_field’
netCDF4.c:31078:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:31289:40: error: ‘NC_COMPOUND’ undeclared (first use in this 
function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_vlen’:
netCDF4.c:31950:21: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:32055:7: warning: implicit declaration of function ‘nc_def_vlen’
netCDF4.c:32074:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_vlen’:
netCDF4.c:32185:33: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:32224:5: warning: implicit declaration of function ‘nc_inq_vlen’
netCDF4.c:32243:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘initnetCDF4’:
netCDF4.c:36643:30: error: ‘NC_UBYTE’ undeclared (first use in this 
function)
netCDF4.c:36667:30: error: ‘NC_USHORT’ undeclared (first use in this 
function)
netCDF4.c:36691:30: error: ‘NC_UINT’ undeclared (first use in this function)
netCDF4.c:36703:30: error: ‘NC_INT64’ undeclared (first use in this 
function)
netCDF4.c:36715:30: error: ‘NC_UINT64’ undeclared (first use in this 
function)
netCDF4.c:36776:30: error: ‘NC_FILL_UBYTE’ undeclared (first use in this 
function)
netCDF4.c:36800:30: error: ‘NC_FILL_USHORT’ undeclared (first use in this 
function)
netCDF4.c:36824:39: error: ‘NC_FILL_UINT’ undeclared (first use in this 
function)
netCDF4.c:36836:35: error: ‘NC_FILL_INT64’ undeclared (first use in this 
function)
netCDF4.c:36848:43: error: ‘NC_FILL_UINT64’ undeclared (first use in this 
function)
netCDF4.c: In function ‘__pyx_pf_7netCDF4_6getlibversion’:
netCDF4.c:2513:21: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att_names’:
netCDF4.c:8696:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:8764:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att’:
netCDF4.c:8928:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:8956:10: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:8956:10: note: each undeclared identifier is reported only once for 
each function it appears in
netCDF4.c:9019:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:9334:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_format’:
netCDF4.c:9687:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__set_att’:
netCDF4.c:10221:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:10404:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_types’:
netCDF4.c:10494:3: warning: implicit declaration of function 
‘nc_inq_typeids’
netCDF4.c:10513:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:10612:7: warning: implicit declaration of function 
‘nc_inq_user_type’
netCDF4.c:10631:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:10666:14: error: ‘NC_COMPOUND’ undeclared (first use in this 
function)
netCDF4.c:10802:14: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_dims’:
netCDF4.c:11034:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11106:7: warning: implicit declaration of function ‘nc_inq_dimids’
netCDF4.c:11125:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11209:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_grps’:
netCDF4.c:11353:3: warning: implicit declaration of function ‘nc_inq_grps’
netCDF4.c:11372:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11456:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11492:7: warning: implicit declaration of function 
‘nc_inq_grpname’
netCDF4.c:11511:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_vars’:
netCDF4.c:11707:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11788:7: warning: implicit declaration of function ‘nc_inq_varids’
netCDF4.c:11807:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11900:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:11963:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:12012:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:12093:41: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:12147:20: error: ‘NC_COMPOUND’ undeclared (first use in this 
function)
netCDF4.c:12245:20: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c:12411:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:12460:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset___init__’:
netCDF4.c:13119:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_1close’:
netCDF4.c:13376:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_2sync’:
netCDF4.c:13453:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_5set_fill_on’:
netCDF4.c:13589:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_6set_fill_off’:
netCDF4.c:13667:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_8renameDimension’:
netCDF4.c:13994:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_12renameVariable’:
netCDF4.c:14884:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_18delncattr’:
netCDF4.c:15447:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_5Group___init__’:
netCDF4.c:16522:5: warning: implicit declaration of function ‘nc_def_grp’
netCDF4.c:16541:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:16603:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension___init__’:
netCDF4.c:17093:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_1__len__’:
netCDF4.c:17173:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_2isunlimited’:
netCDF4.c:17265:5: warning: implicit declaration of function 
‘nc_inq_unlimdims’
netCDF4.c:17284:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:17365:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable___init__’:
netCDF4.c:18689:7: warning: implicit declaration of function 
‘nc_get_var_chunk_cache’
netCDF4.c:18708:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:18744:7: warning: implicit declaration of function 
‘nc_set_var_chunk_cache’
netCDF4.c:18763:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:18827:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:18916:11: warning: implicit declaration of function 
‘nc_def_var_deflate’
netCDF4.c:18974:22: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19013:9: warning: implicit declaration of function 
‘nc_def_var_fletcher32’
netCDF4.c:19057:22: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19105:33: error: ‘NC_CONTIGUOUS’ undeclared (first use in this 
function)
netCDF4.c:19143:33: error: ‘NC_CHUNKED’ undeclared (first use in this 
function)
netCDF4.c:19280:11: warning: implicit declaration of function 
‘nc_def_var_chunking’
netCDF4.c:19333:24: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19378:9: warning: implicit declaration of function 
‘nc_def_var_endian’
netCDF4.c:19378:166: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in 
this function)
netCDF4.c:19402:166: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this 
function)
netCDF4.c:19487:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19543:9: warning: implicit declaration of function 
‘nc_def_var_fill’
netCDF4.c:19587:22: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:19847:16: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_1_getdims’:
netCDF4.c:19971:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:20016:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:20082:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_6delncattr’:
netCDF4.c:20886:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_7filters’:
netCDF4.c:21013:3: warning: implicit declaration of function 
‘nc_inq_var_deflate’
netCDF4.c:21032:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:21058:3: warning: implicit declaration of function 
‘nc_inq_var_fletcher32’
netCDF4.c:21077:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_8endian’:
netCDF4.c:21270:3: warning: implicit declaration of function 
‘nc_inq_var_endian’
netCDF4.c:21289:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:21324:10: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in this 
function)
netCDF4.c:21346:10: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this 
function)
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_9chunking’:
netCDF4.c:21469:3: warning: implicit declaration of function 
‘nc_inq_var_chunking’
netCDF4.c:21488:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_10get_var_chunk_cache’:
netCDF4.c:21670:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_11set_var_chunk_cache’:
netCDF4.c:22020:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_17_assign_vlen’:
netCDF4.c:23950:3: error: ‘nc_vlen_t’ undeclared (first use in this 
function)
netCDF4.c:23950:14: error: ‘__pyx_v_vldata’ undeclared (first use in this 
function)
netCDF4.c:24632:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:24733:35: error: expected expression before ‘)’ token
netCDF4.c:24779:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_23_put’:
netCDF4.c:26223:3: error: ‘nc_vlen_t’ undeclared (first use in this 
function)
netCDF4.c:26223:14: error: ‘__pyx_v_vldata’ undeclared (first use in this 
function)
netCDF4.c:26798:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:27065:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:27112:37: error: expected expression before ‘)’ token
netCDF4.c:27304:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_24_get’:
netCDF4.c:27378:3: error: ‘nc_vlen_t’ undeclared (first use in this 
function)
netCDF4.c:27378:14: error: ‘__pyx_v_vldata’ undeclared (first use in this 
function)
netCDF4.c:27909:18: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:28103:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:28200:37: error: expected expression before ‘)’ token
netCDF4.c:28277:20: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_compound’:
netCDF4.c:29404:3: warning: implicit declaration of function 
‘nc_def_compound’
netCDF4.c:29423:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:29862:7: warning: implicit declaration of function 
‘nc_insert_compound’
netCDF4.c:29881:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:29993:21: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:30199:11: warning: implicit declaration of function 
‘nc_insert_array_compound’
netCDF4.c:30218:23: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:30320:23: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_compound’:
netCDF4.c:30926:3: warning: implicit declaration of function 
‘nc_inq_compound’
netCDF4.c:30945:15: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:31059:5: warning: implicit declaration of function 
‘nc_inq_compound_field’
netCDF4.c:31078:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c:31289:40: error: ‘NC_COMPOUND’ undeclared (first use in this 
function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_vlen’:
netCDF4.c:31950:21: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:32055:7: warning: implicit declaration of function ‘nc_def_vlen’
netCDF4.c:32074:19: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_vlen’:
netCDF4.c:32185:33: error: ‘NC_STRING’ undeclared (first use in this 
function)
netCDF4.c:32224:5: warning: implicit declaration of function ‘nc_inq_vlen’
netCDF4.c:32243:17: warning: assignment discards qualifiers from pointer target 
type
netCDF4.c: In function ‘initnetCDF4’:
netCDF4.c:36643:30: error: ‘NC_UBYTE’ undeclared (first use in this 
function)
netCDF4.c:36667:30: error: ‘NC_USHORT’ undeclared (first use in this 
function)
netCDF4.c:36691:30: error: ‘NC_UINT’ undeclared (first use in this function)
netCDF4.c:36703:30: error: ‘NC_INT64’ undeclared (first use in this 
function)
netCDF4.c:36715:30: error: ‘NC_UINT64’ undeclared (first use in this 
function)
netCDF4.c:36776:30: error: ‘NC_FILL_UBYTE’ undeclared (first use in this 
function)
netCDF4.c:36800:30: error: ‘NC_FILL_USHORT’ undeclared (first use in this 
function)
netCDF4.c:36824:39: error: ‘NC_FILL_UINT’ undeclared (first use in this 
function)
netCDF4.c:36836:35: error: ‘NC_FILL_INT64’ undeclared (first use in this 
function)
netCDF4.c:36848:43: error: ‘NC_FILL_UINT64’ undeclared (first use in this 
function)
error: Command "gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall 
-Wstrict-prototypes -I/usr/include -I/usr/include 
-I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 
-c netCDF4.c -o build/temp.cygwin-1.7.9-i686-2.6/netCDF4.o" failed with exit 
status 1

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