Robert@DESKTOP-14EL82S /usr/local/bin/Platypus_0.8.1 $ ./buildPlatypus.sh Building Platypus running build running build_py running build running build_py running build running build_py running build running build_py running build running build_py running build running build_py running build running build_py running build running build_py running build running build_ext building 'htslibWrapper' extension gcc -fno-strict-aliasing -ggdb -O2 -pipe -Wimplicit-function-declaration -fdebug-prefix-map=/usr/src/ports/python/python-2.7.10-1.x86_64/build=/usr/src/debug/python-2.7.10-1 -fdebug-prefix-map=/usr/src/ports/python/python-2.7.10-1.x86_64/src/Python-2.7.10=/usr/src/debug/python-2.7.10-1 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/usr/include/python2.7 -c htslibWrapper.c -o build/temp.cygwin-2.4.0-x86_64-2.7/htslibWrapper.o -msse2 -msse3 -funroll-loops -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -fPIC htslibWrapper.c:1:0: warning: -fPIC ignored for target (all code is position independent) /* Generated by Cython 0.21.1 */ ^ gcc -shared -Wl,--enable-auto-image-base -L. build/temp.cygwin-2.4.0-x86_64-2.7/htslibWrapper.o -L/usr/lib/python2.7/config -L/usr/lib -lhts -lpython2.7 -o build/lib.cygwin-2.4.0-x86_64-2.7/htslibWrapper.dll /usr/lib/gcc/x86_64-pc-cygwin/4.9.3/../../../../x86_64-pc-cygwin/bin/ld: cannot find -lhts collect2: error: ld returned 1 exit status error: command 'gcc' failed with exit status 1
Setup failed. Check previous lines for errors Bob May DNA Projects I2b L415, I2c L596 HG, Spriggs of Cleve SA Family & Tyler Surname and ISOGG YTree -- Problem reports: http://cygwin.com/problems.html FAQ: http://cygwin.com/faq/ Documentation: http://cygwin.com/docs.html Unsubscribe info: http://cygwin.com/ml/#unsubscribe-simple
