Author: mmichaud
Date: 2009-05-29 07:06:13 -0700 (Fri, 29 May 2009)
New Revision: 16843
Added:
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BooleanPropHandler.java
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BoundedPropHandler.java
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/FlexiblyBoundedPropHandler.java
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListMultipleSelectionPropHandler.java
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListSingleSelectionPropHandler.java
Removed:
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/AppCL3.java
Log:
[]
Deleted: csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/AppCL3.java
===================================================================
--- csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/AppCL3.java
2009-05-29 14:01:54 UTC (rev 16842)
+++ csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/AppCL3.java
2009-05-29 14:06:13 UTC (rev 16843)
@@ -1,133 +0,0 @@
-package org.example;
-
-import org.apache.commons.cli.CommandLine;
-import org.apache.commons.cli.CommandLineParser;
-import org.apache.commons.cli.HelpFormatter;
-import org.apache.commons.cli.Option;
-import org.apache.commons.cli.Options;
-import org.apache.commons.cli.ParseException;
-import org.apache.commons.cli.PosixParser;
-import org.example.tunable.*;
-import org.example.tunable.internal.props.*;
-import org.example.tunable.internal.cl.*;
-import org.example.command.*;
-
-import java.util.*;
-
-public class AppCL3
-{
- public static void main(String[] args) {
-
- java.util.List<taskFactory> list = new
java.util.ArrayList<taskFactory>();
- list.add(0,new taskFactory(new TunableSampler(), "This is a
TaskFactory example for TunableSampler" ));
- list.add(1,new taskFactory(new PrintSomething(), "This is a
TaskFactory example for PrintSomething" ));
- list.add(2,new taskFactory(new JActiveModules(), "This is a
TaskFactory example for JActiveModules" ));
-
- Options options = new Options();
- for ( taskFactory tf : list ){
- options.addOption( tf.getOption() );
- }
- options.addOption("h", "listTask", false, "Display all the
available taskFactories.");
-
-
-
- CommandLineParser parser = new PosixParser();
- CommandLine line = null;
- String[] args1 = new String[1];
- String[] args2 = null;
- java.util.List test = new java.util.ArrayList();
-
- try {
- if(args.length>1){
- args2 = new String[args.length-1];
-
- for(int i=0;i<args.length;i++)test.add(args[i]);
- args1[0]= (String) test.get(0);
-
- for(int i=0;i<test.size()-1;i++)args2[i]=(String)
test.get(i+1);
- line = parser.parse(options, args1);
- }
- else line = parser.parse(options, args);
-
- } catch (ParseException e) {
- System.err.println("Parsing command line failed: " +
e.getMessage());
- printHelp(options);
- System.exit(1);
- }
-
- // use what is found on the command line to set values
- if (line.hasOption("h")) {
- printHelp(options);
- System.exit(0);
- }
-
- for(taskFactory tf : list) tf.checkFactory(line,args2);
-
- if(args.length==0){
- printHelp(options);
- System.exit(0);
- }
- }
-
- private static void printHelp(Options options) {
- HelpFormatter formatter = new HelpFormatter();
- System.out.println("\n");
- formatter.printHelp("java -Xmx512M -jar cytoscape.jar
[Options]","\nHere are the different taskFactories implemented :", options,"");
- }
-
-
-
- static private class taskFactory{
- Command com;
- String desc;
- String name;
- private taskFactory(Command com,String desc){
- this.com=com;
- this.desc=desc;
- this.name=com.getClass().getSimpleName();
- }
-
- Option getOption(){
- return new Option(name.substring(0, 3),name,false,desc);
- }
-
- void checkFactory(CommandLine line,String[] args){
- if(line.hasOption(name.substring(0, 3))){
- for(String ar : args)System.out.println("the arguments
= "+ar);
- getFactory(com,args);
- }
- }
-
- void getFactory(Command com,String[] args){
- TunableInterceptor cl = new CLTunableInterceptor(args);
- cl.loadTunables(com);
-// if ( com instanceof HandlerController )
-//
((HandlerController)com).controlHandlers(cl.getHandlers(com));
- cl.createUI(com);
- System.out.println("\n"+"result of command execution:");
- com.execute();
- System.out.println();
-
-
- Properties p = new Properties();
- p.setProperty("printSomething.firstName","marge");
- TunableInterceptor lp = new LoadPropsInterceptor(p);
- lp.loadTunables(com);
-// if ( com instanceof HandlerController )
-//
((HandlerController)com).controlHandlers(lp.getHandlers(com));
- lp.createUI(com);
- System.out.println("result of command execution after
properties have been loaded:");
- com.execute();
- System.out.println();
-
-
- Properties store = new Properties();
- TunableInterceptor sp = new StorePropsInterceptor(store);
- sp.loadTunables(com);
-// if ( com instanceof HandlerController )
-//
((HandlerController)com).controlHandlers(sp.getHandlers(com));
- sp.createUI(com);
- System.out.println("result of storing properties
interceptor:\n"+store.toString()+"\n");
- }
- }
-}
Added:
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BooleanPropHandler.java
===================================================================
---
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BooleanPropHandler.java
2009-05-29 14:01:54 UTC (rev 16842)
+++
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BooleanPropHandler.java
2009-05-29 14:06:13 UTC (rev 16843)
@@ -0,0 +1,34 @@
+package org.example.tunable.internal.props;
+
+import java.lang.reflect.Field;
+import java.util.Properties;
+
+import org.example.tunable.Tunable;
+
+
+public class BooleanPropHandler extends AbstractPropHandler{
+
+ public BooleanPropHandler(Field f, Object o, Tunable t){
+ super(f,o,t);
+ }
+
+
+ public Properties getProps(){
+ Properties p = new Properties();
+ try{
+ p.setProperty(propKey,f.get(o).toString());
+ }catch(Exception e){e.printStackTrace();}
+ return p;
+ }
+
+
+ public void setProps(Properties p){
+ try{
+ if(p.containsKey(propKey)){
+ String val = p.getProperty(propKey).toString();
+ if(val != null) f.set(o, Boolean.valueOf(val));
+ }
+ }catch(Exception e){e.printStackTrace();}
+ }
+
+}
\ No newline at end of file
Added:
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BoundedPropHandler.java
===================================================================
---
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BoundedPropHandler.java
2009-05-29 14:01:54 UTC (rev 16842)
+++
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/BoundedPropHandler.java
2009-05-29 14:06:13 UTC (rev 16843)
@@ -0,0 +1,36 @@
+package org.example.tunable.internal.props;
+
+import java.lang.reflect.Field;
+import java.util.Properties;
+
+import org.example.tunable.Tunable;
+import org.example.tunable.util.AbstractBounded;
+
+
+public class BoundedPropHandler<T extends AbstractBounded<?>> extends
AbstractPropHandler {
+
+ public BoundedPropHandler(Field f, Object o, Tunable t){
+ super(f,o,t);
+ }
+
+ public Properties getProps() {
+ Properties p = new Properties();
+ try {
+ p.setProperty(propKey,
((T)f.get(o)).getValue().toString());
+ }catch(IllegalAccessException iae) {iae.printStackTrace();}
+ return p;
+ }
+
+ public void setProps(Properties p) {
+ try{
+ if(p.containsKey(propKey)){
+ T bo = (T) f.get(o);
+ String val = p.getProperty(propKey).toString();
+ if(val != null) {
+ bo.setValue(val);
+ f.set(o, bo);
+ }
+ }
+ }catch(Exception e){e.printStackTrace();}
+ }
+}
\ No newline at end of file
Added:
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/FlexiblyBoundedPropHandler.java
===================================================================
---
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/FlexiblyBoundedPropHandler.java
2009-05-29 14:01:54 UTC (rev 16842)
+++
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/FlexiblyBoundedPropHandler.java
2009-05-29 14:06:13 UTC (rev 16843)
@@ -0,0 +1,41 @@
+package org.example.tunable.internal.props;
+
+import java.lang.reflect.Field;
+import java.util.Properties;
+
+import org.example.tunable.Tunable;
+import org.example.tunable.util.AbstractFlexiblyBounded;
+
+
+public class FlexiblyBoundedPropHandler<T extends AbstractFlexiblyBounded<?>>
extends AbstractPropHandler {
+
+ public FlexiblyBoundedPropHandler(Field f, Object o, Tunable t){
+ super(f,o,t);
+ }
+
+ public Properties getProps() {
+ Properties p = new Properties();
+ try {
+ T bo = (T)f.get(o);
+ p.put(propKey, new
String(bo.getLowerBound()+","+bo.getValue()+","+bo.getUpperBound()+","+bo.isLowerBoundStrict()+","+bo.isUpperBoundStrict()));
+ }catch(IllegalAccessException iae) {iae.printStackTrace();}
+ return p;
+ }
+
+ public void setProps(Properties p) {
+ try{
+ if(p.containsKey(propKey)){
+ T bo = (T)f.get(o);
+ String[] vals =
p.getProperty(propKey).split(",");
+ if(vals != null){
+ bo.setLowerBound(vals[0]);
+ bo.setValue(vals[1]);
+ bo.setUpperBound(vals[2]);
+
bo.setLowerBoundStrict(Boolean.getBoolean(vals[3]));
+
bo.setUpperBoundStrict(Boolean.getBoolean(vals[4]));
+ }
+ if(bo != null) f.set(o, bo);
+ }
+ }catch(Exception e){e.printStackTrace();}
+ }
+}
\ No newline at end of file
Added:
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListMultipleSelectionPropHandler.java
===================================================================
---
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListMultipleSelectionPropHandler.java
2009-05-29 14:01:54 UTC (rev 16842)
+++
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListMultipleSelectionPropHandler.java
2009-05-29 14:06:13 UTC (rev 16843)
@@ -0,0 +1,35 @@
+package org.example.tunable.internal.props;
+
+import java.lang.reflect.Field;
+import java.util.Arrays;
+import java.util.Properties;
+import org.example.tunable.Tunable;
+import org.example.tunable.util.ListMultipleSelection;
+
+public class ListMultipleSelectionPropHandler<T> extends AbstractPropHandler {
+
+ public ListMultipleSelectionPropHandler(Field f, Object o, Tunable t){
+ super(f,o,t);
+ }
+
+ public Properties getProps() {
+ Properties p = new Properties();
+ try{
+
p.setProperty(propKey,((ListMultipleSelection<T>)f.get(o)).getSelectedValues().toString());
+ }catch (Exception e){e.printStackTrace();}
+ return p;
+ }
+
+ public void setProps(Properties p) {
+ try{
+ if(p.containsKey(propKey)){
+ ListMultipleSelection<T> lms =
(ListMultipleSelection<T>) f.get(o);
+ T[] tab =
(T[])p.getProperty(propKey).split(",");
+ if(tab != null){
+
lms.setSelectedValues(Arrays.asList(tab));
+ f.set(o, lms);
+ }
+ }
+ }catch(Exception e){e.printStackTrace();}
+ }
+}
Added:
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListSingleSelectionPropHandler.java
===================================================================
---
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListSingleSelectionPropHandler.java
2009-05-29 14:01:54 UTC (rev 16842)
+++
csplugins/trunk/ucsd/mes/anntun/src/main/java/org/example/tunable/internal/props/ListSingleSelectionPropHandler.java
2009-05-29 14:06:13 UTC (rev 16843)
@@ -0,0 +1,37 @@
+package org.example.tunable.internal.props;
+
+import java.lang.reflect.Field;
+import java.util.Properties;
+
+import org.example.tunable.Tunable;
+import org.example.tunable.util.ListSingleSelection;
+
+public class ListSingleSelectionPropHandler<T> extends AbstractPropHandler{
+
+
+ public ListSingleSelectionPropHandler(Field f, Object o, Tunable t){
+ super(f,o,t);
+ }
+
+ public Properties getProps(){
+ Properties p = new Properties();
+ try{
+
p.setProperty(propKey,((ListSingleSelection<T>)f.get(o)).getSelectedValue().toString());
+ }catch(Exception e){e.printStackTrace();}
+ return p;
+ }
+
+ public void setProps(Properties p){
+ try{
+ if(p.containsKey(propKey)){
+ ListSingleSelection<T> lss =
(ListSingleSelection<T>) f.get(o);
+ T val = (T) p.getProperty(propKey).toString();
+ if(val != null) {
+ lss.setSelectedValue(val);
+ f.set(o, lss);
+ }
+ }
+ }catch(Exception e){e.printStackTrace();}
+ }
+
+}
\ No newline at end of file
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