Author: mes
Date: 2010-02-02 12:14:41 -0800 (Tue, 02 Feb 2010)
New Revision: 19135

Modified:
   cytoscape/trunk/src/cytoscape/plugin/JarUtil.java
Log:
just changed some formatting

Modified: cytoscape/trunk/src/cytoscape/plugin/JarUtil.java
===================================================================
--- cytoscape/trunk/src/cytoscape/plugin/JarUtil.java   2010-02-02 20:12:28 UTC 
(rev 19134)
+++ cytoscape/trunk/src/cytoscape/plugin/JarUtil.java   2010-02-02 20:14:41 UTC 
(rev 19135)
@@ -1,5 +1,40 @@
 package cytoscape.plugin;
 
+/*
+ Copyright (c) 2010, The Cytoscape Consortium (www.cytoscape.org)
+
+ The Cytoscape Consortium is:
+ - Institute for Systems Biology
+ - University of California San Diego
+ - Memorial Sloan-Kettering Cancer Center
+ - Institut Pasteur
+ - Agilent Technologies
+
+ This library is free software; you can redistribute it and/or modify it
+ under the terms of the GNU Lesser General Public License as published
+ by the Free Software Foundation; either version 2.1 of the License, or
+ any later version.
+
+ This library is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY, WITHOUT EVEN THE IMPLIED WARRANTY OF
+ MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE.  The software and
+ documentation provided hereunder is on an "as is" basis, and the
+ Institute for Systems Biology and the Whitehead Institute
+ have no obligations to provide maintenance, support,
+ updates, enhancements or modifications.  In no event shall the
+ Institute for Systems Biology and the Whitehead Institute
+ be liable to any party for direct, indirect, special,
+ incidental or consequential damages, including lost profits, arising
+ out of the use of this software and its documentation, even if the
+ Institute for Systems Biology and the Whitehead Institute
+ have been advised of the possibility of such damage.  See
+ the GNU Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public License
+ along with this library; if not, write to the Free Software Foundation,
+ Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
+ */
+
 import java.io.File;
 import java.io.IOException;
 import java.io.InputStream;
@@ -21,8 +56,10 @@
  */
 class JarUtil {
 
-       // Bug 2055 changing regexp used to match jars
-       // Was "\\w+\\.jar", which seemed unecessarily restrictive
+       /** 
+        * Bug 2055 changing regexp used to match jars
+        * Was "\\w+\\.jar", which seemed unecessarily restrictive
+        */
        static final String MATCH_JAR_REGEXP = ".*\\.jar$";
 
        /**
@@ -39,12 +76,12 @@
                switch (type) {
                case JAR:
                        JarFile jar = new JarFile(fileName);
-            try {
-                pluginClassName = getManifestAttribute(jar.getManifest());
-            } finally {
-                if (jar != null) 
-                    jar.close();
-            }
+                       try {
+                               pluginClassName = 
getManifestAttribute(jar.getManifest());
+                       } finally {
+                               if (jar != null) 
+                                       jar.close();
+                       }
                        break;
 
                case ZIP:
@@ -53,47 +90,46 @@
                        if (Entries.size() <= 0) {
                                String[] FilePath = fileName.split("/");
                                fileName = FilePath[FilePath.length - 1];
-                               throw new IOException(
-                                               fileName
-                                                               + " does not 
contain any jar files or is not a zip file.");
+                               throw new IOException( fileName + 
+                                                      " does not contain any 
jar files or is not a zip file.");
                        }
 
-            ZipFile zf = null;
+                       ZipFile zf = null;
 
-            try {
+                       try {
                                zf = new ZipFile(fileName);
-                for (ZipEntry entry : Entries) {
-                    String entryName = entry.getName();
+                               for (ZipEntry entry : Entries) {
+                                       String entryName = entry.getName();
 
-                    InputStream is = null;
+                                       InputStream is = null;
 
-                    try {
-                        JarInputStream jis = null;
+                                       try {
+                                               JarInputStream jis = null;
 
                                                is = ZipUtil.readFile(zf, 
entryName);
-                        try {
+                                               try {
                                                        jis = new 
JarInputStream(is);
-                            pluginClassName = 
getManifestAttribute(jis.getManifest());
-                        } finally {
-                            if (jis != null) 
-                                jis.close();
-                        }
-                    } finally {
-                        if (is != null) 
-                            is.close();
-                    }
-                }
-            } finally {
-                if (zf != null) 
-                       zf.close();
-            }
+                                                       pluginClassName = 
getManifestAttribute(jis.getManifest());
+                                               } finally {
+                                                       if (jis != null) 
+                                                               jis.close();
+                                               }
+                                       } finally {
+                                               if (is != null) 
+                                                       is.close();
+                                       }
+                               }
+                       } finally {
+                               if (zf != null) 
+                                       zf.close();
+                       }
                }
 
                } catch (Throwable t) {
                        throw new IOException(t);
                }
 
-        return pluginClassName;
+               return pluginClassName;
        }
 
        /*

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