See <http://cytoscape.wodaklab.org/hudson/job/Cytoscape%202.X%20coreplugins/15/>
------------------------------------------ [...truncated 1161 lines...] AU ManualLayout/src/main/resources/V_DIST_BOTTOM.gif AU ManualLayout/src/main/resources/H_STACK_CENTER.gif AU ManualLayout/src/main/resources/V_ALIGN_CENTER.gif AU ManualLayout/src/main/resources/H_DIST_LEFT.gif AU ManualLayout/src/main/resources/V_STACK_RIGHT.gif AU ManualLayout/src/main/resources/V_DIST_CENTER.gif AU ManualLayout/src/main/resources/V_STACK_CENTER.gif AU ManualLayout/src/main/resources/H_STACK_TOP.gif AU ManualLayout/src/main/resources/H_ALIGN_RIGHT.gif AU ManualLayout/src/main/resources/H_STACK_BOTTOM.gif AU ManualLayout/src/main/resources/V_ALIGN_TOP.gif AU ManualLayout/src/main/resources/H_ALIGN_CENTER.gif AU ManualLayout/src/main/resources/V_ALIGN_BOTTOM.gif AU ManualLayout/src/main/resources/V_STACK_LEFT.gif A ManualLayout/src/main/resources/ManualLayout A ManualLayout/src/main/resources/ManualLayout/plugin.props AU ManualLayout/src/main/resources/H_DIST_RIGHT.gif AU ManualLayout/src/main/resources/V_DIST_TOP.gif AU ManualLayout/src/main/resources/H_DIST_CENTER.gif A ManualLayout/pom.xml A QuickFind A QuickFind/src A QuickFind/src/test A QuickFind/src/test/java A QuickFind/src/test/java/csplugins A QuickFind/src/test/java/csplugins/test A QuickFind/src/test/java/csplugins/test/widgets A QuickFind/src/test/java/csplugins/test/widgets/test A QuickFind/src/test/java/csplugins/test/widgets/test/uiTests A QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view A QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view/RunQuickFindPanel.java A QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view/RunTextIndexComboBox.java A QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view/package.html A QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/package.html A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text/TestNumberIndex.java A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text/TestTextIndex.java A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text/package.html A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/view A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/view/TestTextIndexComboBox.java A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/view/package.html A QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/package.html A QuickFind/src/test/java/csplugins/test/widgets/test/package.html A QuickFind/src/test/java/csplugins/test/quickfind A QuickFind/src/test/java/csplugins/test/quickfind/test A QuickFind/src/test/java/csplugins/test/quickfind/test/TestCyAttributesUtil.java A QuickFind/src/test/java/csplugins/test/quickfind/test/TestQuickFind.java A QuickFind/src/test/java/csplugins/test/quickfind/test/package.html A QuickFind/src/test/java/csplugins/test/package.html A QuickFind/src/test/resources A QuickFind/src/main A QuickFind/src/main/java A QuickFind/src/main/java/csplugins A QuickFind/src/main/java/csplugins/widgets A QuickFind/src/main/java/csplugins/widgets/autocomplete A QuickFind/src/main/java/csplugins/widgets/autocomplete/index A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/IndexFactory.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/NumberIndex.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/NumberIndexImpl.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/Trie.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/GenericIndex.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/Hit.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/GenericIndexImpl.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/TextIndex.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/IndexListener.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/TextIndexImpl.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/index/package.html A QuickFind/src/main/java/csplugins/widgets/autocomplete/view A QuickFind/src/main/java/csplugins/widgets/autocomplete/view/AutoCompleteDocument.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/view/ComboBoxFactory.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/view/TextBoxRenderer.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/view/TextIndexComboBox.java A QuickFind/src/main/java/csplugins/widgets/autocomplete/view/package.html A QuickFind/src/main/java/csplugins/widgets/slider A QuickFind/src/main/java/csplugins/widgets/slider/JRangeSliderExtended.java A QuickFind/src/main/java/csplugins/widgets/slider/package.html A QuickFind/src/main/java/csplugins/quickfind A QuickFind/src/main/java/csplugins/quickfind/view A QuickFind/src/main/java/csplugins/quickfind/view/QuickFindConfigDialog.java A QuickFind/src/main/java/csplugins/quickfind/view/QuickFindPanel.java A QuickFind/src/main/java/csplugins/quickfind/view/package.html A QuickFind/src/main/java/csplugins/quickfind/util A QuickFind/src/main/java/csplugins/quickfind/util/QuickFindImpl.java A QuickFind/src/main/java/csplugins/quickfind/util/CyAttributesUtil.java A QuickFind/src/main/java/csplugins/quickfind/util/QuickFindListener.java A QuickFind/src/main/java/csplugins/quickfind/util/QuickFindFactory.java A QuickFind/src/main/java/csplugins/quickfind/util/TaskMonitorBase.java A QuickFind/src/main/java/csplugins/quickfind/util/IndexType.java A QuickFind/src/main/java/csplugins/quickfind/util/QuickFind.java A QuickFind/src/main/java/csplugins/quickfind/util/package.html A QuickFind/src/main/java/csplugins/quickfind/package.html A QuickFind/src/main/java/csplugins/quickfind/plugin A QuickFind/src/main/java/csplugins/quickfind/plugin/resources A QuickFind/src/main/java/csplugins/quickfind/plugin/QuickFindPlugIn.java A QuickFind/src/main/java/csplugins/quickfind/plugin/package.html A QuickFind/src/main/java/prefuse A QuickFind/src/main/java/prefuse/data A QuickFind/src/main/java/prefuse/data/query A QuickFind/src/main/java/prefuse/data/query/NumberRangeModel.java A QuickFind/src/main/java/prefuse/util A QuickFind/src/main/java/prefuse/util/TypeLib.java A QuickFind/src/main/java/prefuse/util/ui A QuickFind/src/main/java/prefuse/util/ui/JRangeSlider.java A QuickFind/src/main/java/prefuse/util/ui/ValuedRangeModel.java A QuickFind/src/main/resources A QuickFind/src/main/resources/csplugins A QuickFind/src/main/resources/csplugins/quickfind A QuickFind/src/main/resources/csplugins/quickfind/plugin A QuickFind/src/main/resources/csplugins/quickfind/plugin/plugin.props A QuickFind/src/main/resources/resources AU QuickFind/src/main/resources/resources/config.png A QuickFind/UI_Testing.txt A QuickFind/pom.xml A QuickFind/README.txt A EquationFunctions A EquationFunctions/src A EquationFunctions/src/main A EquationFunctions/src/main/java A EquationFunctions/src/main/java/org A EquationFunctions/src/main/java/org/cytoscape A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/InDegree.java A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/OutDegree.java A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/TargetID.java A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/Degree.java A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/SourceID.java A EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/EquationFunctionsPlugin.java A EquationFunctions/src/main/resources A EquationFunctions/src/main/resources/org A EquationFunctions/src/main/resources/org/cytoscape A EquationFunctions/src/main/resources/org/cytoscape/EquationFunctions A EquationFunctions/src/main/resources/org/cytoscape/EquationFunctions/plugin.props A EquationFunctions/pom.xml A EquationFunctions/classes At revision 21390 no change for http://chianti.ucsd.edu/svn/coreplugins/trunk since the previous build No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 38717 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cytoscape%202.X%20coreplugins/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... [INFO] Reactor build order: [INFO] Cytoscape Core Plugins Parent POM [INFO] Advanced Network Merge [INFO] Automatic Layout [INFO] BioMart Client [INFO] BioPAX [INFO] Editor [INFO] Equation Functions [INFO] Manual Layout [INFO] NCBI Client [INFO] PSI-MI [INFO] QuickFind [INFO] RFilters [INFO] SBML Reader [INFO] Table Import [INFO] Attribute Browser [INFO] cPath [INFO] cPath2 [INFO] Filters [INFO] Linkout [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Core Plugins Parent POM [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [site:attach-descriptor] [INFO] [install:install] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cytoscape%202.X%20coreplugins/ws/trunk/target/pom-transformed.xml> to /home/bturner/.m2/repository/cytoscape/coreplugins/parent/2.8.0-SNAPSHOT/parent-2.8.0-SNAPSHOT.pom [INFO] [deploy:deploy] [INFO] Retrieving previous build number from snapshots [INFO] repository metadata for: 'snapshot cytoscape.coreplugins:parent:2.8.0-SNAPSHOT' could not be found on repository: snapshots, so will be created Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/2.8.0-SNAPSHOT/parent-2.8.0-20100815.005550-1.pom [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cytoscape%202.X%20coreplugins/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape 2.X coreplugins/modules/cytoscape.coreplugins$parent/builds/2010-08-14_20-55-42/archive/cytoscape.coreplugins/parent/2.8.0-SNAPSHOT/pom.xml [HUDSON] Archiving /home/bturner/.m2/repository/cytoscape/coreplugins/parent/2.8.0-SNAPSHOT/parent-2.8.0-SNAPSHOT.pom to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cytoscape 2.X coreplugins/modules/cytoscape.coreplugins$parent/builds/2010-08-14_20-55-42/archive/cytoscape.coreplugins/parent/2.8.0-20100815.005550-1/parent-2.8.0-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Error deploying artifact: Failed to transfer file: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/parent/2.8.0-SNAPSHOT/parent-2.8.0-20100815.005550-1.pom. Return code is: 500 [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 4 seconds [INFO] Finished at: Sat Aug 14 20:55:51 EDT 2010 [INFO] Final Memory: 24M/343M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://10.20.1.18:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... [INFO] Reactor build order: [INFO] Cytoscape Core Plugins Parent POM [INFO] Advanced Network Merge [INFO] Automatic Layout [INFO] BioMart Client [INFO] BioPAX [INFO] Editor [INFO] Equation Functions [INFO] Manual Layout [INFO] NCBI Client [INFO] PSI-MI [INFO] QuickFind [INFO] RFilters [INFO] SBML Reader [INFO] Table Import [INFO] Attribute Browser [INFO] cPath [INFO] cPath2 [INFO] Filters [INFO] Linkout [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Core Plugins Parent POM [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 1.8 [INFO] [sonar-core:internal] [INFO] Sonar JDBC URL: jdbc:mysql://10.20.1.18:3306/sonar [INFO] Sonar JDBC login: sonar [INFO] Sonar JDBC driver: com.mysql.jdbc.Driver [INFO] Sonar branch: [INFO] Cytoscape Core Plugins Parent POM Selected quality profile : Cytoscape, language=java [INFO] Cytoscape Core Plugins Parent POM Executing org.apache.maven.plugins:maven-surefire-plugin:[] [INFO] Cytoscape Core Plugins Parent POM [class org.sonar.plugins.cpd.CpdMavenCollector] executing [INFO] Cytoscape Core Plugins Parent POM Collecting duplications... [INFO] Cytoscape Core Plugins Parent POM File suffixes : java [INFO] Cytoscape Core Plugins Parent POM Exclusions : {} [INFO] Cytoscape Core Plugins Parent POM [class org.sonar.plugins.core.SaveProfileMavenCollector] executing [INFO] Cytoscape Core Plugins Parent POM [class org.sonar.plugins.core.SaveProjectLinksFromPom] executing [INFO] Cytoscape Core Plugins Parent POM [class org.sonar.plugins.surefire.SurefireMavenCollector] executing [INFO] Cytoscape Core Plugins Parent POM parsing <http://cytoscape.wodaklab.org/hudson/job/Cytoscape%202.X%20coreplugins/ws/trunk/target/surefire-reports> [INFO] Advanced Network Merge Selected quality profile : Cytoscape, language=java [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Findbugs needs sources to be compiled. Please edit pom.xml to set the <outputDirectory> node and build before executing sonar. [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 15 seconds [INFO] Finished at: Sat Aug 14 20:56:50 EDT 2010 [INFO] Final Memory: 19M/343M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
