See <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/1492/changes>
Changes: [kono] "Node," "Edge," and "Network" static Strings are removed. To specify one of these types in your code, you need to use Class<?> of the data type (for example, CyNode.class). VizMapGui is currently turned off until this refactoring is finished. ------------------------------------------ Started by an SCM change Checking out http://chianti.ucsd.edu/svn/core3/ding-presentation-impl/trunk A osgi.bnd A src A src/test A src/test/java A src/test/java/org A src/test/java/org/cytoscape A src/test/java/org/cytoscape/view A src/test/java/org/cytoscape/view/CytoscapeViewTest.java.asdf A src/test/java/org/cytoscape/view/impl A src/test/java/org/cytoscape/view/impl/FlagAndSelectionHandlerTest.java.asdf A src/test/java/org/cytoscape/view/DVisualLexiconTest.java A src/main A src/main/java A src/main/java/org A src/main/java/org/cytoscape A src/main/java/org/cytoscape/ding A src/main/java/org/cytoscape/ding/EdgeView.java A src/main/java/org/cytoscape/ding/LabelPosition.java A src/main/java/org/cytoscape/ding/LabelPlacerGraphic.java A src/main/java/org/cytoscape/ding/GraphViewChangeEvent.java A src/main/java/org/cytoscape/ding/NodeShape.java AU src/main/java/org/cytoscape/ding/LabelPlacerControl.java A src/main/java/org/cytoscape/ding/GraphViewChangeListener.java A src/main/java/org/cytoscape/ding/Bend.java A src/main/java/org/cytoscape/ding/LineStyle.java A src/main/java/org/cytoscape/ding/icon A src/main/java/org/cytoscape/ding/icon/VisualPropertyIcon.java A src/main/java/org/cytoscape/ding/icon/LineTypeIcon.java A src/main/java/org/cytoscape/ding/icon/ArrowIcon.java A src/main/java/org/cytoscape/ding/icon/DefaultIconFactory.java A src/main/java/org/cytoscape/ding/icon/NodeIcon.java A src/main/java/org/cytoscape/ding/CyGraphAllLOD.java.hold A src/main/java/org/cytoscape/ding/ArrowShape.java AU src/main/java/org/cytoscape/ding/CyLabelPositionPropertyEditor.java A src/main/java/org/cytoscape/ding/BendSelectedEdgesAction.java.hold A src/main/java/org/cytoscape/ding/StraightenSelectedEdgesAction.java.hold A src/main/java/org/cytoscape/ding/SelectionModeAction.java.hold A src/main/java/org/cytoscape/ding/Label.java A src/main/java/org/cytoscape/ding/NodeView.java A src/main/java/org/cytoscape/ding/CyGraphLOD.java.hold A src/main/java/org/cytoscape/ding/impl A src/main/java/org/cytoscape/ding/impl/GraphViewNodesRestoredEvent.java A src/main/java/org/cytoscape/ding/impl/AnchorTwoDVisualProperty.java A src/main/java/org/cytoscape/ding/impl/GraphViewNodesHiddenEvent.java A src/main/java/org/cytoscape/ding/impl/DEdgeView.java A src/main/java/org/cytoscape/ding/impl/GraphViewChangeEventAdapter.java A src/main/java/org/cytoscape/ding/impl/IntermediateEdgeDetails.java A src/main/java/org/cytoscape/ding/impl/InnerCanvas.java A src/main/java/org/cytoscape/ding/impl/InnerCanvasEvent.java A src/main/java/org/cytoscape/ding/impl/GraphViewEdgesRestoredEvent.java A src/main/java/org/cytoscape/ding/impl/DEdgeDetails.java A src/main/java/org/cytoscape/ding/impl/GraphViewEdgesHiddenEvent.java A src/main/java/org/cytoscape/ding/impl/IntermediateNodeDetails.java A src/main/java/org/cytoscape/ding/impl/GraphViewFactoryImpl.java.hold A src/main/java/org/cytoscape/ding/impl/ViewportChangeListener.java A src/main/java/org/cytoscape/ding/impl/DingRenderingEngineFactory.java A src/main/java/org/cytoscape/ding/impl/Justify.java A src/main/java/org/cytoscape/ding/impl/FontTwoDVisualProperty.java A src/main/java/org/cytoscape/ding/impl/StrokeTwoDVisualProperty.java A src/main/java/org/cytoscape/ding/impl/DNodeDetails.java A src/main/java/org/cytoscape/ding/impl/GraphViewNodesSelectedEvent.java A src/main/java/org/cytoscape/ding/impl/FlagAndSelectionHandler.java A src/main/java/org/cytoscape/ding/impl/DGraphView.java A src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java A src/main/java/org/cytoscape/ding/impl/ArrowShapeTwoDVisualProperty.java A src/main/java/org/cytoscape/ding/impl/GraphViewNodesUnselectedEvent.java A src/main/java/org/cytoscape/ding/impl/AddDeleteHandler.java A src/main/java/org/cytoscape/ding/impl/Anchor.java A src/main/java/org/cytoscape/ding/impl/InternalFrameComponent.java A src/main/java/org/cytoscape/ding/impl/GraphViewChangeListenerChain.java A src/main/java/org/cytoscape/ding/impl/ViewState.java A src/main/java/org/cytoscape/ding/impl/ArbitraryGraphicsCanvas.java A src/main/java/org/cytoscape/ding/impl/DingNavigationRenderingEngineFactory.java A src/main/java/org/cytoscape/ding/impl/DingCanvas.java A src/main/java/org/cytoscape/ding/impl/InnerCanvasListener.java A src/main/java/org/cytoscape/ding/impl/GraphViewEdgesSelectedEvent.java A src/main/java/org/cytoscape/ding/impl/GraphViewEdgesUnselectedEvent.java A src/main/java/org/cytoscape/ding/impl/DNodeView.java A src/main/java/org/cytoscape/ding/impl/IntegerTwoDVisualProperty.java A src/main/java/org/cytoscape/ding/impl/JustifyTwoDVisualProperty.java A src/main/java/org/cytoscape/ding/impl/DingNavigationRenderingEngine.java A src/main/java/org/cytoscape/ding/impl/ContentChangeListener.java A src/main/java/org/cytoscape/ding/impl/PopupMenuHelper.java A src/main/java/org/cytoscape/ding/impl/ContentChangeListenerChain.java A src/main/java/org/cytoscape/ding/impl/DVisualLexicon.java A src/main/java/org/cytoscape/ding/impl/NodeShapeTwoDVisualProperty.java A src/main/java/org/cytoscape/ding/impl/ViewportChangeListenerChain.java A src/main/java/org/cytoscape/ding/GraphViewObject.java A src/main/java/org/cytoscape/ding/GraphViewFactory.java A src/main/java/org/cytoscape/ding/ViewChangeEdit.java AU src/main/java/org/cytoscape/ding/LabelPositionChooser.java A src/main/java/org/cytoscape/ding/ShowGraphicsDetailsAction.java.hold AU src/main/java/org/cytoscape/ding/LabelPositionCellRenderer.java A src/main/java/org/cytoscape/ding/PrintLOD.java A src/main/java/org/cytoscape/ding/GraphView.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring A src/main/resources/META-INF/spring/bundle-context-osgi.xml A src/main/resources/META-INF/spring/bundle-context.xml A pom.xml U . At revision 22828 WARNING: clock of the subversion server appears to be out of sync. This can result in inconsistent check out behavior. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-agent-1.369.jar:/R1/tools/maven/apache-maven-2.1.0/boot/classworlds-1.1.jar hudson.maven.agent.Main /R1/tools/maven/apache-maven-2.1.0 /R1/resources/webservers/tomcat_2/webapps/hudson/WEB-INF/lib/remoting-1.369.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven-interceptor-1.369.jar 56303 /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven2.1-interceptor-1.2.jar <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.ding-presentation-impl [INFO] task-segment: [deploy] [INFO] ------------------------------------------------------------------------ [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 0 resource [INFO] snapshot org.cytoscape:graph-render:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [INFO] snapshot org.cytoscape:graph-render:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot org.cytoscape:spacial:1.0-SNAPSHOT: checking for updates from cytoscape_snapshots [WARNING] repository metadata for: 'snapshot org.cytoscape:spacial:1.0-SNAPSHOT' could not be retrieved from repository: cytoscape_snapshots due to an error: GET request of: org/cytoscape/spacial/1.0-SNAPSHOT/maven-metadata.xml.sha1 from cytoscape_snapshots failed [INFO] Repository 'cytoscape_snapshots' will be blacklisted [INFO] snapshot org.cytoscape:swing-util:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot phoebe:phoebe.dnd:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot cytoscape.core.build:compiled-bundle-settings:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot cytoscape.core.build:shared-plugin-settings:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot cytoscape:core:1.0-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [INFO] snapshot org.cytoscape:viewmodel-impl:3.0.0-alpha2-SNAPSHOT: checking for updates from cytoscape_biopax_snapshot [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Ding%20Presentation%20Implementation/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Ding Presentation Implementation/modules/org.cytoscape$ding-presentation-impl/builds/2010-11-12_17-06-50/archive/org.cytoscape/ding-presentation-impl/1.0-SNAPSHOT/pom.xml [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Error building POM (may not be this project's POM). Project ID: org.cytoscape:viewmodel-impl Reason: Error getting POM for 'org.cytoscape:viewmodel-impl' from the repository: Unable to store local copy of metadata: Error updating group repository metadata org.cytoscape:viewmodel-impl:pom:3.0.0-alpha2-SNAPSHOT for project org.cytoscape:viewmodel-impl [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 9 seconds [INFO] Finished at: Fri Nov 12 17:07:01 EST 2010 [INFO] Final Memory: 33M/349M [INFO] ------------------------------------------------------------------------ Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.ding-presentation-impl [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom 1863/511b 511b downloaded (sonar-core-maven-plugin-20101112010106.pom) [WARNING] *** CHECKSUM FAILED - Invalid checksum file - RETRYING Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom 1863/511b 511b downloaded (sonar-core-maven-plugin-20101112010106.pom) [WARNING] Unable to get resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' from repository sonar (http://localhost:8021/sonar/deploy/maven): Error copying temporary file to the final destination: /home/bturner/.m2/repository/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom (No space left on device) Downloading: http://download.java.net/maven/2/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository maven2-repository.dev.java.net (http://download.java.net/maven/2) Downloading: http://download.java.net/maven/1/org.codehaus.sonar.runtime/poms/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository central (http://repo1.maven.org/maven2) Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom 1863/511b 511b downloaded (sonar-core-maven-plugin-20101112010106.pom) [WARNING] *** CHECKSUM FAILED - Invalid checksum file - RETRYING Downloading: http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom 1863/511b 511b downloaded (sonar-core-maven-plugin-20101112010106.pom) [WARNING] Unable to get resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' from repository sonar (http://localhost:8021/sonar/deploy/maven): Error copying temporary file to the final destination: /home/bturner/.m2/repository/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom (No space left on device) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/releases//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository cytoscape_releases (http://cytoscape.wodaklab.org/nexus/content/repositories/releases/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository cytoscape_thirdparty (http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository cytoscape_biopax_release (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository ops4j-release (http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository l2fprod-release (http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository spring-osgi (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi/) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101112010106/sonar-core-maven-plugin-20101112010106.pom [INFO] Unable to find resource 'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106' in repository central (http://repo1.maven.org/maven2) [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to build project for plugin 'org.codehaus.sonar.runtime:sonar-core-maven-plugin': POM 'org.codehaus.sonar.runtime:sonar-core-maven-plugin' not found in repository: Unable to download the artifact from any repository org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101112010106 from the specified remote repositories: cytoscape_releases (http://cytoscape.wodaklab.org/nexus/content/repositories/releases/), cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/), cytoscape_thirdparty (http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty/), cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/), maven2-repository.dev.java.net (http://download.java.net/maven/2), l2fprod-release (http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release/), cytoscape_biopax_release (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release/), sonar (http://localhost:8021/sonar/deploy/maven), ops4j-release (http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release/), Nexus (http://cytoscape.wodaklab.org/nexus/content/groups/public), maven-repository.dev.java.net (http://download.java.net/maven/1), spring-osgi (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi/) for project org.codehaus.sonar.runtime:sonar-core-maven-plugin [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 10 seconds [INFO] Finished at: Fri Nov 12 17:07:17 EST 2010 [INFO] Final Memory: 14M/213M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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