See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/1/>
------------------------------------------ [...truncated 99 lines...] <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[39,25] cannot find symbol symbol : class AbstractUndoableEdit location: package org.cytoscape.work <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[52,54] cannot find symbol symbol : class AbstractUndoableEdit location: package org.cytoscape.work <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[87,48] cannot find symbol symbol : variable Cytoscape location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[107,2] cannot find symbol symbol : constructor DataTableModel(<nulltype>,java.util.List<java.lang.String>,<nulltype>) location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[160,2] cannot find symbol symbol : class NodeView location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[161,2] cannot find symbol symbol : class EdgeView location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[162,8] cannot find symbol symbol : class CyNetworkView location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[162,32] cannot find symbol symbol : variable Cytoscape location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[164,6] cannot find symbol symbol : variable Cytoscape location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[164,43] cannot find symbol symbol : variable Cytoscape location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[165,8] cannot find symbol symbol : class GraphObject location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[193,45] cannot find symbol symbol : variable AttributeBrowser location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[192,3] cannot find symbol symbol : variable AttributeBrowser location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[209,11] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[224,11] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[239,44] cannot find symbol symbol : variable AttributeBrowser location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[238,2] cannot find symbol symbol : variable AttributeBrowser location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[253,29] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[254,28] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[259,24] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[289,45] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[289,9] cannot find symbol symbol : variable CyAttributesUtils location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[310,40] cannot find symbol symbol : class ColumnComparator location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[322,7] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[353,11] operator != cannot be applied to org.cytoscape.browser.internal.DataEditAction,<nulltype> <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[354,22] package cytoscape.util.undo does not exist <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[357,48] cannot find symbol symbol : variable data location: class org.cytoscape.browser.internal.DataTableModel <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[377,12] operator != cannot be applied to org.cytoscape.browser.internal.DataEditAction,<nulltype> <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataTableModel.java>:[378,40] postEdit(javax.swing.undo.UndoableEdit) in javax.swing.undo.UndoableEditSupport cannot be applied to (org.cytoscape.browser.internal.DataEditAction) <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[89,1] method does not override or implement a method from a supertype <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[94,1] method does not override or implement a method from a supertype <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[158,30] cannot find symbol symbol : method getLastEquationError() location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[202,30] cannot find symbol symbol : method getLastEquationError() location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[246,30] cannot find symbol symbol : method getLastEquationError() location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[285,30] cannot find symbol symbol : method getLastEquationError() location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[321,30] cannot find symbol symbol : method getLastEquationError() location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[363,37] cannot find symbol symbol : method getListElementType(java.lang.String) location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[364,60] cannot find symbol symbol : variable CyAttributes location: class org.cytoscape.browser.internal.DataEditAction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[365,61] cannot find symbol symbol : variable CyAttributes location: class org.cytoscape.browser.internal.DataEditAction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[366,63] cannot find symbol symbol : variable CyAttributes location: class org.cytoscape.browser.internal.DataEditAction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[367,64] cannot find symbol symbol : variable CyAttributes location: class org.cytoscape.browser.internal.DataEditAction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[377,8] cannot find symbol symbol : method setListAttribute(java.lang.Object,java.lang.String,org.cytoscape.equations.Equation) location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[379,30] cannot find symbol symbol : method getLastEquationError() location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[388,29] cannot find symbol symbol : method getListAttribute(java.lang.Object,java.lang.String) location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[409,8] cannot find symbol symbol : method setListAttribute(java.lang.Object,java.lang.String,java.util.List) location: interface org.cytoscape.model.CyTable <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[581,32] cannot find symbol symbol : variable Cytoscape location: class org.cytoscape.browser.internal.DataEditAction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[615,49] cannot find symbol symbol : variable AttrUtil location: class org.cytoscape.browser.internal.DataEditAction <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/src/main/java/org/cytoscape/browser/internal/DataEditAction.java>:[618,31] org.cytoscape.equations.EqnCompiler is abstract; cannot be instantiated [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 8 seconds [INFO] Finished at: Wed Nov 24 19:00:41 EST 2010 [INFO] Final Memory: 50M/493M [INFO] ------------------------------------------------------------------------ Waiting for Hudson to finish collecting data Sending e-mails to: [email protected] channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/parent/3.0.0-alpha4-SNAPSHOT/parent-3.0.0-alpha4-SNAPSHOT.pom [INFO] Unable to find resource 'org.cytoscape:parent:pom:3.0.0-alpha4-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Table Browser Implementation [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.4 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.jpa.dialect.MySql [INFO] ------------- Analyzing Cytoscape Table Browser Implementation [INFO] Selected quality profile : [name=Cytoscape,language=java] [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 306 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 77 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 487 ms [INFO] Java bytecode scan... [WARN] Class 'org/cytoscape/browser/internal/TableBrowser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/DataTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/DataEditAction' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableBrowser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/DataTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/DataEditAction' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/TableBrowser' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/ValidatedObjectAndEditString' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/DataTableModel' is not accessible through the ClassLoader. [WARN] Class 'org/cytoscape/browser/internal/DataEditAction' is not accessible through the ClassLoader. [INFO] Java bytecode scan done: 29 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 7 ms [INFO] Squid extraction done: 199 ms [INFO] Sensor SquidSensor done: 760 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Findbugs output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/sonar/findbugs-result.xml> [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Can not execute Findbugs No classes found to analyze in <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Table%20Browser%20impl/ws/trunk/target/classes> */R1/resources/M2_MAVEN/repository/org/cytoscape/swing-application-api/1.0-SNAPSHOT/swing-application-api-1.0-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/cytoscape-sun/jhall/1.0/jhall-1.0.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/work-api/3.0.0-alpha2-SNAPSHOT/work-api-3.0.0-alpha2-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/ops4j/pax/logging/pax-logging-api/1.5.2/pax-logging-api-1.5.2.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/session-api/3.0.0-alpha2-SNAPSHOT/session-api-3.0.0-alpha2-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/vizmap-api/3.0.0-alpha2-SNAPSHOT/vizmap-api-3.0.0-alpha2-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/viewmodel-api/3.0.0-alpha3-SNAPSHOT/viewmodel-api-3.0.0-alpha3-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/model-api/3.0.0-alpha2-SNAPSHOT/model-api-3.0.0-alpha2-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/event-api/3.0.0-alpha2-SNAPSHOT/event-api-3.0.0-alpha2-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/presentation-api/3.0.0-alpha2-SNAPSHOT/presentation-api-3.0.0-alpha2-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/property-api/3.0.0-alpha2-SNAPSHOT/property-api-3.0.0-alpha2-SNAPSHOT.jar */R1/resources/M2_MAVEN/repository/org/cytoscape/equations-api/1.0-SNAPSHOT/equations-api-1.0-SNAPSHOT.jar */tmp/findbugs3876549328054398185.jar */tmp/findbugs2466960266839967398.jar */R1/tools/java/jdk1.6.0_20/jre/lib/resources.jar */R1/tools/java/jdk1.6.0_20/jre/lib/rt.jar */R1/tools/java/jdk1.6.0_20/jre/lib/jsse.jar */R1/tools/java/jdk1.6.0_20/jre/lib/jce.jar */R1/tools/java/jdk1.6.0_20/jre/lib/charsets.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/dnsns.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/localedata.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/sunjce_provider.jar */R1/tools/java/jdk1.6.0_20/jre/lib/ext/sunpkcs11.jar [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 10 seconds [INFO] Finished at: Wed Nov 24 19:01:02 EST 2010 [INFO] Final Memory: 47M/599M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
