Author: scooter
Date: 2011-10-18 18:05:08 -0700 (Tue, 18 Oct 2011)
New Revision: 27226
Modified:
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/AbstractClusterAlgorithm.java
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/networkClusterers/MCL/MCLCluster.java
Log:
Changes to make case more consistent
Modified:
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/AbstractClusterAlgorithm.java
===================================================================
---
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/AbstractClusterAlgorithm.java
2011-10-18 22:26:46 UTC (rev 27225)
+++
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/AbstractClusterAlgorithm.java
2011-10-19 01:05:08 UTC (rev 27226)
@@ -90,7 +90,7 @@
clusterProperties.add(new Tunable("advancedGroup", "Cytoscape
Advanced Settings",
Tunable.GROUP, new Integer(3),
new Boolean(true), null,
Tunable.COLLAPSABLE));
- clusterProperties.add(new Tunable("clusterAttrName", "Cluster
Attribute",
+ clusterProperties.add(new Tunable("clusterAttrName", "Cluster
attribute",
Tunable.STRING,
clusterAttributeName));
clusterProperties.add(new Tunable("createGroups", "Create
metanodes with results",
Tunable.BOOLEAN, new
Boolean(false)));
Modified:
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/networkClusterers/MCL/MCLCluster.java
===================================================================
---
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/networkClusterers/MCL/MCLCluster.java
2011-10-18 22:26:46 UTC (rev 27225)
+++
csplugins/trunk/ucsf/scooter/clusterMaker/src/clusterMaker/algorithms/networkClusterers/MCL/MCLCluster.java
2011-10-19 01:05:08 UTC (rev 27226)
@@ -107,7 +107,7 @@
// Inflation Parameter
clusterProperties.add(new Tunable("inflation_parameter",
- "Granularity Parameter
(inflation value)",
+ "Granularity parameter
(inflation value)",
Tunable.DOUBLE, new
Double(2.0),
(Object)null, (Object)null,
0));
@@ -119,7 +119,7 @@
new Boolean(true), null,
Tunable.COLLAPSABLE));
// Clustering Threshold
clusterProperties.add(new Tunable("clusteringThresh",
- "Weak EdgeWeight Pruning
Threshold",
+ "Weak edge weight pruning
threshold",
Tunable.DOUBLE, new
Double(1e-15),
(Object)null, (Object)null,
0));
@@ -131,13 +131,13 @@
// Number of iterations
clusterProperties.add(new Tunable("maxResidual",
- "The maximum residual value",
+ "Maximum residual value",
Tunable.DOUBLE, new
Double(.0001),
(Object)null, (Object)null,
0));
// Maximum number of CPU's to use
clusterProperties.add(new Tunable("maxThreads",
- "The maximum number of
threads",
+ "Maximum number of threads",
Tunable.INTEGER, new
Integer(0),
(Object)null, (Object)null,
0));
--
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