See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/649/changes>
Changes: [jm] Fixed references to parent POMs ------------------------------------------ [...truncated 1176 lines...] A io-api/src/main/java/org/cytoscape/io/read/CySessionReader.java A io-api/src/main/java/org/cytoscape/io/read/CyNetworkReaderManager.java A io-api/src/main/java/org/cytoscape/io/read/CyPropertyReader.java A io-api/src/main/java/org/cytoscape/io/read/VizmapReaderManager.java A io-api/src/main/java/org/cytoscape/io/read/package-info.java A io-api/src/main/java/org/cytoscape/io/read/CyTableReader.java A io-api/src/main/java/org/cytoscape/io/read/InputStreamTaskFactory.java A io-api/src/main/java/org/cytoscape/io/read/CyNetworkReader.java A io-api/src/main/java/org/cytoscape/io/read/VizmapReader.java A io-api/src/main/java/org/cytoscape/io/read/AbstractInputStreamTaskFactory.java A io-api/src/main/java/org/cytoscape/io/read/CySessionReaderManager.java A io-api/src/main/java/org/cytoscape/io/read/CyPropertyReaderManager.java A io-api/src/main/java/org/cytoscape/io/CyFileFilterProvider.java A io-api/src/main/java/org/cytoscape/io/util A io-api/src/main/java/org/cytoscape/io/util/package-info.java A io-api/src/main/java/org/cytoscape/io/util/StreamUtil.java A io-api/src/main/java/org/cytoscape/io/util/RecentlyOpenedTracker.java A io-api/src/main/resources A io-api/src/main/resources/META-INF A io-api/pom.xml A work-swing-api A work-swing-api/src A work-swing-api/src/test A work-swing-api/src/test/java A work-swing-api/src/test/java/org A work-swing-api/src/test/java/org/cytoscape A work-swing-api/src/test/java/org/cytoscape/work A work-swing-api/src/test/java/org/cytoscape/work/swing A work-swing-api/src/test/java/org/cytoscape/work/swing/SimpleGUITunableHandlerFactoryTest.java A work-swing-api/src/test/java/org/cytoscape/work/swing/AbstractGUITunableHandlerTest.java A work-swing-api/src/test/java/org/cytoscape/work/swing/HasAnnotatedMethod.java A work-swing-api/src/test/java/org/cytoscape/work/swing/HasAnnotatedField.java A work-swing-api/src/main A work-swing-api/src/main/java A work-swing-api/src/main/java/org A work-swing-api/src/main/java/org/cytoscape A work-swing-api/src/main/java/org/cytoscape/work A work-swing-api/src/main/java/org/cytoscape/work/swing A work-swing-api/src/main/java/org/cytoscape/work/swing/SimpleGUITunableHandlerFactory.java A work-swing-api/src/main/java/org/cytoscape/work/swing/AbstractGUITunableHandler.java A work-swing-api/src/main/java/org/cytoscape/work/swing/package-info.java A work-swing-api/src/main/java/org/cytoscape/work/swing/GUITunableHandlerFactory.java A work-swing-api/src/main/java/org/cytoscape/work/swing/undo A work-swing-api/src/main/java/org/cytoscape/work/swing/undo/package-info.java A work-swing-api/src/main/java/org/cytoscape/work/swing/undo/SwingUndoSupport.java A work-swing-api/src/main/java/org/cytoscape/work/swing/DynamicSubmenuListener.java A work-swing-api/src/main/java/org/cytoscape/work/swing/DialogTaskManager.java A work-swing-api/src/main/java/org/cytoscape/work/swing/DirectlyPresentableTunableHandler.java A work-swing-api/src/main/java/org/cytoscape/work/swing/GUITunableHandler.java A work-swing-api/src/main/java/org/cytoscape/work/swing/PanelTaskManager.java A work-swing-api/pom.xml U . At revision 29888 Parsing POMs Failed to transfer File: http://code.cytoscape.org/nexus/content/repositories/spring-osgi/org/cytoscape/parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml does not exist Failed to transfer File: http://code.cytoscape.org/nexus/content/repositories/biopax-snapshot/org/cytoscape/parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml does not exist Failed to transfer File: http://code.cytoscape.org/nexus/content/repositories/spring-osgi-external/org/cytoscape/parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml does not exist Failed to transfer File: http://code.cytoscape.org/nexus/content/repositories/zodiac-release/org/cytoscape/parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml does not exist Failed to transfer File: http://code.cytoscape.org/nexus/content/repositories/zodiac-milestone/org/cytoscape/parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml does not exist Downloaded artifact http://code.cytoscape.org/nexus/content/repositories/snapshots//org/cytoscape/parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml Failed to transfer File: http://maven.itextpdf.com/org/cytoscape/parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml does not exist Modules changed, recalculating dependency graph [trunk] $ /usr/lib/jvm/default-java/bin/java -Djava.awt.headless=true -Xmx768M -XX:MaxPermSize=256M -cp /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.2.jar:/opt/maven/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven /var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.11.jar /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.2.jar 44039 <===[JENKINS REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... [INFO] ------------------------------------------------------------------------ [INFO] Reactor Build Order: [INFO] [INFO] Cytoscape API Parent Project POM [INFO] Cytoscape Event API (event-api) [INFO] Cytoscape Model API (model-api) [INFO] Cytoscape View Model API (viewmodel-api) [INFO] Cytoscape Work API (work-api) [INFO] Cytoscape Presentation API (presentation-api) [INFO] Cytoscape Property API (property-api) [INFO] Cytoscape VizMap API (vizmap-api) [INFO] Cytoscape Session API (session-api) [INFO] Cytoscape Core Task API (core-task-api) [INFO] Cytoscape Equations API (equations-api) [INFO] Cytoscape IO API (io-api) [INFO] Cytoscape Layout API (layout-api) [INFO] Cytoscape Groups API (group-api) [INFO] Cytoscape Service API (service-api) [INFO] Cytoscape Webservice API (webservice-api) [INFO] Cytoscape Data Source API (datasource-api) [INFO] Cytoscape Application API (application-api) [INFO] Cytoscape App API (app-api) [INFO] Cytoscape Work Swing API (work-swing-api) [INFO] Cytoscape Swing Application API (swing-application-api) [INFO] Cytoscape VizMap GUI API (vizmap-gui-api) [INFO] Cytoscape Swing Utility API (swing-util-api) [INFO] Cytoscape Webservice Swing API (webservice-swing-api) [INFO] Cytoscape Swing App API (swing-app-api) [INFO] Cytoscape Command Executor API (command-executor-api) [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape API Parent Project POM 3.0.0-beta3-SNAPSHOT [INFO] ------------------------------------------------------------------------ ignoring exception during new ExecutedMojo null log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ api-parent --- [INFO] [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ api-parent --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/api-parent/3.0.0-beta3-SNAPSHOT/api-parent-3.0.0-beta3-SNAPSHOT.pom [INFO] [INFO] --- maven-deploy-plugin:2.5:deploy (default-deploy) @ api-parent --- Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/3.0.0-beta3-SNAPSHOT/api-parent-3.0.0-beta3-20120713.161158-1.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/3.0.0-beta3-SNAPSHOT/api-parent-3.0.0-beta3-20120713.161158-1.pom (3 KB at 30.3 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/maven-metadata.xml (430 B at 21.0 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/3.0.0-beta3-SNAPSHOT/maven-metadata.xml (612 B at 8.9 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/api-parent/maven-metadata.xml (476 B at 11.3 KB/sec) [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 API/modules/org.cytoscape$api-parent/builds/2012-07-13_11-11-49/archive/org.cytoscape/api-parent/3.0.0-beta3-SNAPSHOT/api-parent-3.0.0-beta3-SNAPSHOT.pom [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Event API (event-api) 3.0.0-beta3-SNAPSHOT [INFO] ------------------------------------------------------------------------ Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/apache/maven/plugins/maven-install-plugin/maven-metadata.xml Downloading: http://code.cytoscape.org/nexus/content/repositories/releases/org/apache/maven/plugins/maven-install-plugin/maven-metadata.xml Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/apache/maven/plugins/maven-resources-plugin/maven-metadata.xml Downloading: http://code.cytoscape.org/nexus/content/repositories/releases/org/apache/maven/plugins/maven-resources-plugin/maven-metadata.xml Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/apache/maven/plugins/maven-deploy-plugin/maven-metadata.xml Downloading: http://code.cytoscape.org/nexus/content/repositories/releases/org/apache/maven/plugins/maven-deploy-plugin/maven-metadata.xml [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ event-api --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/src/main/resources> [INFO] Copying 0 resource [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ event-api --- [INFO] Compiling 7 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/target/classes> [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/src/test/resources> [INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ event-api --- [INFO] [INFO] Compiling 12 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/target/test-classes> [INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ event-api --- [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/src/test/java/org/cytoscape/event/AbstractCyEventHelperTest.java>:[197,24] invalid inferred types for E; inferred type does not conform to declared bound(s) inferred: org.cytoscape.event.CyPayloadEvent<S,P> bound(s): org.cytoscape.event.CyPayloadEvent<java.lang.String,java.lang.String> [INFO] 1 error [INFO] ------------------------------------------------------------- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 API/modules/org.cytoscape$event-api/builds/2012-07-13_11-11-49/archive/org.cytoscape/event-api/3.0.0-beta3-SNAPSHOT/event-api-3.0.0-beta3-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Cytoscape API Parent Project POM .................. SUCCESS [4.027s] [INFO] Cytoscape Event API (event-api) ................... FAILURE [2.528s] [INFO] Cytoscape Model API (model-api) ................... SKIPPED [INFO] Cytoscape View Model API (viewmodel-api) .......... SKIPPED [INFO] Cytoscape Work API (work-api) ..................... SKIPPED [INFO] Cytoscape Presentation API (presentation-api) ..... SKIPPED [INFO] Cytoscape Property API (property-api) ............. SKIPPED [INFO] Cytoscape VizMap API (vizmap-api) ................. SKIPPED [INFO] Cytoscape Session API (session-api) ............... SKIPPED [INFO] Cytoscape Core Task API (core-task-api) ........... SKIPPED [INFO] Cytoscape Equations API (equations-api) ........... SKIPPED [INFO] Cytoscape IO API (io-api) ......................... SKIPPED [INFO] Cytoscape Layout API (layout-api) ................. SKIPPED [INFO] Cytoscape Groups API (group-api) .................. SKIPPED [INFO] Cytoscape Service API (service-api) ............... SKIPPED [INFO] Cytoscape Webservice API (webservice-api) ......... SKIPPED [INFO] Cytoscape Data Source API (datasource-api) ........ SKIPPED [INFO] Cytoscape Application API (application-api) ....... SKIPPED [INFO] Cytoscape App API (app-api) ....................... SKIPPED [INFO] Cytoscape Work Swing API (work-swing-api) ......... SKIPPED [INFO] Cytoscape Swing Application API (swing-application-api) SKIPPED [INFO] Cytoscape VizMap GUI API (vizmap-gui-api) ......... SKIPPED [INFO] Cytoscape Swing Utility API (swing-util-api) ...... SKIPPED [INFO] Cytoscape Webservice Swing API (webservice-swing-api) SKIPPED [INFO] Cytoscape Swing App API (swing-app-api) ........... SKIPPED [INFO] Cytoscape Command Executor API (command-executor-api) SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 9.019s [INFO] Finished at: Fri Jul 13 11:12:02 GMT-05:00 2012 [INFO] Final Memory: 14M/34M [INFO] ------------------------------------------------------------------------ mavenExecutionResult exceptions not empty message : Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:testCompile (default-testCompile) on project event-api: Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/src/test/java/org/cytoscape/event/AbstractCyEventHelperTest.java>:[197,24] invalid inferred types for E; inferred type does not conform to declared bound(s) inferred: org.cytoscape.event.CyPayloadEvent<S,P> bound(s): org.cytoscape.event.CyPayloadEvent<java.lang.String,java.lang.String> cause : Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/src/test/java/org/cytoscape/event/AbstractCyEventHelperTest.java>:[197,24] invalid inferred types for E; inferred type does not conform to declared bound(s) inferred: org.cytoscape.event.CyPayloadEvent<S,P> bound(s): org.cytoscape.event.CyPayloadEvent<java.lang.String,java.lang.String> Stack trace : org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:testCompile (default-testCompile) on project event-api: Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/src/test/java/org/cytoscape/event/AbstractCyEventHelperTest.java>:[197,24] invalid inferred types for E; inferred type does not conform to declared bound(s) inferred: org.cytoscape.event.CyPayloadEvent<S,P> bound(s): org.cytoscape.event.CyPayloadEvent<java.lang.String,java.lang.String> at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:112) at hudson.maven.Maven3Builder.call(Maven3Builder.java:70) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:287) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:679) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20API/ws/trunk/event-api/src/test/java/org/cytoscape/event/AbstractCyEventHelperTest.java>:[197,24] invalid inferred types for E; inferred type does not conform to declared bound(s) inferred: org.cytoscape.event.CyPayloadEvent<S,P> bound(s): org.cytoscape.event.CyPayloadEvent<java.lang.String,java.lang.String> at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:656) at org.apache.maven.plugin.TestCompilerMojo.execute(TestCompilerMojo.java:161) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] channel stopped Skipping sonar analysis due to bad build status FAILURE -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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