See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/7/changes>
Changes: [jm] Fixes #1451: Moved dependency check out of inner loop (different bug) and added extra check for existing mappings when doing dependency check. ------------------------------------------ [...truncated 4061 lines...] A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/Points2D.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/Decorators.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/filter A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/LongHistogramFilter.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/Points2DFilter.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/ComplexParamFilter.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/filter/IntHistogramFilter.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/CCInfoInvComparator.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/Messages.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/IntRange.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/IntHistogram.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/NetworkStats.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/LogBinDistribution.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/NodeBetweenInfo.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/LongHistogram.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/IntHistogramFilterSettings.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/Settings.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/BooleanSettings.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/LongHistogramFilterSettings.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/GridSettings.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/BarsSettings.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/ReturnTypeComparator.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/PointShape.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/SettingsGroup.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/data/settings/Points2DGroup.java A 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network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/ChartExpandablePanel.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/LongHistogramFilterDialog.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/Points2DFilterDialog.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/ComplexParamFilterDialog.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/filter/IntHistogramFilterDialog.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/CompareDialog.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/ComplexParamVisualizer.java A network-analyzer-impl/src/main/java/de/mpg/mpi_inf/bioinf/netanalyzer/ui/AnalysisTableModel.java A 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At revision 30381 Parsing POMs Modules changed, recalculating dependency graph [trunk] $ /usr/lib/jvm/default-java/bin/java -Djava.awt.headless=true -Xmx768M -XX:MaxPermSize=256M -cp /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.2.jar:/opt/maven/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven /var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.11.jar /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.2.jar 57181 <===[JENKINS REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... mavenExecutionResult exceptions not empty message : Some problems were encountered while processing the POMs: [ERROR] 'dependencies.dependency.version' for org.cytoscape:service-api:jar must be a valid version but is '${cytoscape.api.version}'. @ line 340, column 12 Stack trace : org.apache.maven.project.ProjectBuildingException: Some problems were encountered while processing the POMs: [ERROR] 'dependencies.dependency.version' for org.cytoscape:service-api:jar must be a valid version but is '${cytoscape.api.version}'. @ line 340, column 12 at org.apache.maven.project.DefaultProjectBuilder.build(DefaultProjectBuilder.java:339) at org.apache.maven.DefaultMaven.collectProjects(DefaultMaven.java:632) at org.apache.maven.DefaultMaven.getProjectsForMavenReactor(DefaultMaven.java:581) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:233) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:112) at hudson.maven.Maven3Builder.call(Maven3Builder.java:70) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:287) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:636) channel stopped Skipping sonar analysis due to bad build status FAILURE -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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