See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/1946/>
------------------------------------------ [...truncated 4240 lines...] [INFO] --- maven-deploy-plugin:2.5:deploy (default-deploy) @ io-impl-parent --- Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/maven-metadata.xml (842 B at 4.7 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/io-impl-parent-3.0.0-beta2-20121115.011106-283.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/io-impl-parent-3.0.0-beta2-20121115.011106-283.pom (6 KB at 38.5 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml (387 B at 4.9 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/maven-metadata.xml (842 B at 7.1 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/maven-metadata.xml (387 B at 11.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/io-impl-parent-3.0.0-beta2-20121115.011106-283-sources.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/io-impl-parent-3.0.0-beta2-20121115.011106-283-sources.jar (36940 KB at 8765.9 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/maven-metadata.xml (842 B at 20.6 KB/sec) [JENKINS] Archiving /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/workspace/trunk/io-impl/pom.xml to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$io-impl-parent/builds/2012-11-14_20-03-37/archive/org.cytoscape/io-impl-parent/3.0.0-beta2-SNAPSHOT/io-impl-parent-3.0.0-beta2-SNAPSHOT.pom [JENKINS] Archiving /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/workspace/trunk/io-impl/target/io-impl-parent-3.0.0-beta2-SNAPSHOT-sources.jar to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$io-impl-parent/builds/2012-11-14_20-03-37/archive/org.cytoscape/io-impl-parent/3.0.0-beta2-20121115.011106-283/io-impl-parent-3.0.0-beta2-20121115.011106-283-sources.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape IO Impl (io-impl) 3.0.0-beta2-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] Started execution. [INFO] [INFO] --- maven-jaxb2-plugin:0.8.1:generate (vizmap) @ io-impl --- [INFO] JAXB API is loaded from the [jar:file:/opt/jdk1.6.0_32/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.8.1:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-core:jar:0.8.1:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.7:compile, junit:junit:jar:4.8.1:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.codehaus.plexus:plexus-utils:jar:1.5.15:compile, org.jvnet.jaxb2.maven2:maven-jaxb22-plugin:jar:0.8.1:compile, com.sun.xml.bind:jaxb-impl:jar:2.2.5-b10:compile, com.sun.xml.bind:jaxb-xjc:jar:2.2.5-b10:compile] [INFO] specVersion:2.1 [INFO] encoding:UTF-8 [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd> [INFO] schemaIncludes:[vizmap.xsd] [INFO] schemaExcludes:null [INFO] schemas:[] [INFO] bindingDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd> [INFO] bindingIncludes:[*.xjb] [INFO] bindingExcludes:null [INFO] bindings:[] [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:null [INFO] generatePackage:org.cytoscape.io.internal.util.vizmap.model [INFO] generateDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:false [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/classes]> [INFO] plugins:null [INFO] episodes:null [INFO] useDependenciesAsEpisodes:false [INFO] xjcPlugins:null [INFO] episodes:null [INFO] schemaFiles (calculated):[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/vizmap.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1 generateDirectory=<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap> generatePackage=org.cytoscape.io.internal.util.vizmap.model schemaLanguage=null schemas=[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/vizmap.xsd]> bindings=[] plugins=[] catalogs=[] catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@1bff9b9 readOnly=false extension=false strict=true verbose=true debugMode=false arguments=[-episode, <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/META-INF/sun-jaxb.episode]]> Using java.util.ServiceLoader [INFO] File [<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/vizmap.xsd]> was changed since the last build. [INFO] File [<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/pom.xml]> was changed since the last build. [INFO] Checking up-to-date depends [[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/vizmap.xsd,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/pom.xml]].> [INFO] Checking up-to-date produces [[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/Node.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/Network.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/Dependency.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/VisualStyle.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/AttributeType.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/DiscreteMapping.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/ObjectFactory.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/DiscreteMappingEntry.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/VisualProperty.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/ContinuousMappingPoint.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/PassthroughMapping.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/Vizmap.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/ContinuousMapping.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/org/cytoscape/io/internal/util/vizmap/model/Edge.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/vizmap/META-INF/sun-jaxb.episode]].> [INFO] Depends timestamp [1,352,941,402,000], produces timestamp [1,352,941,432,000]. [INFO] Skipped XJC execution. Generated sources were up-to-date. [INFO] [INFO] --- maven-jaxb2-plugin:0.8.1:generate (cysession) @ io-impl --- [INFO] Started execution. [INFO] JAXB API is loaded from the [jar:file:/opt/jdk1.6.0_32/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.8.1:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-core:jar:0.8.1:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.7:compile, junit:junit:jar:4.8.1:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.codehaus.plexus:plexus-utils:jar:1.5.15:compile, org.jvnet.jaxb2.maven2:maven-jaxb22-plugin:jar:0.8.1:compile, com.sun.xml.bind:jaxb-impl:jar:2.2.5-b10:compile, com.sun.xml.bind:jaxb-xjc:jar:2.2.5-b10:compile] [INFO] specVersion:2.1 [INFO] encoding:UTF-8 [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd> [INFO] schemaIncludes:[cysession.xsd] [INFO] schemaExcludes:null [INFO] schemas:[] [INFO] bindingDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd> [INFO] bindingIncludes:[*.xjb] [INFO] bindingExcludes:null [INFO] bindings:[] [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:null [INFO] generatePackage:org.cytoscape.io.internal.util.session.model [INFO] generateDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:false [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/classes]> [INFO] plugins:null [INFO] episodes:null [INFO] useDependenciesAsEpisodes:false [INFO] xjcPlugins:null [INFO] episodes:null [INFO] schemaFiles (calculated):[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cysession.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1 generateDirectory=<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession> generatePackage=org.cytoscape.io.internal.util.session.model schemaLanguage=null schemas=[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cysession.xsd]> bindings=[] plugins=[] catalogs=[] catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@9ea2d5 readOnly=false extension=false strict=true verbose=true debugMode=false arguments=[-episode, <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/META-INF/sun-jaxb.episode]]> Using java.util.ServiceLoader [INFO] File [<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cysession.xsd]> was changed since the last build. [INFO] File [<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/pom.xml]> was changed since the last build. [INFO] Checking up-to-date depends [[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cysession.xsd,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/pom.xml]].> [INFO] Checking up-to-date produces [[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Cytopanel.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Server.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Node.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Parent.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Network.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/OntologyServer.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Child.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Cytopanels.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Cysession.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Ontology.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/HiddenNodes.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/ViewableNodes.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/DesktopSize.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Plugin.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/HiddenEdges.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/NetworkTree.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/ObjectFactory.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/SessionState.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Plugins.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/SelectedEdges.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/NetworkFrame.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Panels.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/SelectedNodes.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/NetworkFrames.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Desktop.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Edge.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/org/cytoscape/io/internal/util/session/model/Panel.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cysession/META-INF/sun-jaxb.episode]].> [INFO] Depends timestamp [1,352,941,402,000], produces timestamp [1,352,941,432,000]. [INFO] Skipped XJC execution. Generated sources were up-to-date. [INFO] [INFO] Started execution. [INFO] JAXB API is loaded from the [jar:file:/opt/jdk1.6.0_32/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.8.1:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-core:jar:0.8.1:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.7:compile, junit:junit:jar:4.8.1:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.codehaus.plexus:plexus-utils:jar:1.5.15:compile, org.jvnet.jaxb2.maven2:maven-jaxb22-plugin:jar:0.8.1:compile, com.sun.xml.bind:jaxb-impl:jar:2.2.5-b10:compile, com.sun.xml.bind:jaxb-xjc:jar:2.2.5-b10:compile] [INFO] specVersion:2.1 [INFO] encoding:UTF-8 [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd> [INFO] schemaIncludes:[cytables.xsd] [INFO] schemaExcludes:null [INFO] schemas:[] [INFO] bindingDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd> [INFO] bindingIncludes:[*.xjb] [INFO] bindingExcludes:null [INFO] bindings:[] [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:null [INFO] generatePackage:org.cytoscape.io.internal.util.cytables.model [INFO] generateDirectory:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:false [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/classes]> [INFO] plugins:null [INFO] episodes:null [INFO] useDependenciesAsEpisodes:false [INFO] xjcPlugins:null [INFO] episodes:null [INFO] schemaFiles (calculated):[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cytables.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1 generateDirectory=<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables> generatePackage=org.cytoscape.io.internal.util.cytables.model schemaLanguage=null schemas=[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cytables.xsd]> bindings=[] plugins=[] catalogs=[] catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@6a97dd readOnly=false extension=false strict=true verbose=true debugMode=false arguments=[-episode, <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables/META-INF/sun-jaxb.episode]]> Using java.util.ServiceLoader [INFO] File [<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cytables.xsd]> was changed since the last build. [INFO] File [<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/pom.xml]> was changed since the last build. [INFO] Checking up-to-date depends [[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/resources/xsd/cytables.xsd,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/pom.xml]].> [INFO] Checking up-to-date produces [[<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/VirtualColumn.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/VirtualColumns.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/CyTables.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/ObjectFactory.java,> <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/generated-sources/xjc/cytables/META-INF/sun-jaxb.episode]].> [INFO] Depends timestamp [1,352,941,402,000], produces timestamp [1,352,941,432,000]. [INFO] Skipped XJC execution. Generated sources were up-to-date. [INFO] --- maven-jaxb2-plugin:0.8.1:generate (cytables) @ io-impl --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ io-impl --- [INFO] Copying 6 resources [INFO] Copying 1 resource [INFO] Copying 1 resource [INFO] Copying 1 resource [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ io-impl --- [INFO] Compiling 211 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/target/classes> [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/org.cytoscape$io-impl/ws/src/main/java/org/cytoscape/io/internal/write/xgmml/GenericXGMMLWriter.java>:[709,-1] cannot access org.cytoscape.view.presentation.property.values.NodeShape bad class file: org/cytoscape/view/presentation/property/values/NodeShape.class(org/cytoscape/view/presentation/property/values:NodeShape.class) unable to access file: corrupted zip file [INFO] 1 error [INFO] ------------------------------------------------------------- -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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