Branch: refs/heads/diff-master Home: https://github.com/PathwayCommons/factoid Commit: fb18fa57cfeaedef71ada09e28ec40054ebb167f https://github.com/PathwayCommons/factoid/commit/fb18fa57cfeaedef71ada09e28ec40054ebb167f Author: Jeffrey <jvw...@gmail.com> Date: 2023-02-06 (Mon, 06 Feb 2023)
Changed paths: M Dockerfile M package-lock.json M package.json A src/client/components/starting-neo4j.js M src/client/components/tasks.js M src/config.js M src/server/routes/api/document/index.js M src/server/routes/index.js M src/views/index.html.ejs A test/biopax/biopax.js A test/biopax/sampleTemplate.json M test/sitemap/docs2Sitemap.js Log Message: ----------- Merge pull request #1115 from PathwayCommons/v0.22.0 v0.22.0 Commit: 449dddac33ac66e72c8fa720e5a3501590e8e7bc https://github.com/PathwayCommons/factoid/commit/449dddac33ac66e72c8fa720e5a3501590e8e7bc Author: Jeffrey <jvw...@gmail.com> Date: 2023-02-21 (Tue, 21 Feb 2023) Changed paths: M .eslintrc.json M .nvmrc M README.md A neo4j-test/connect-neo4j.js A neo4j-test/example.js M package-lock.json M package.json R src/client/components/starting-neo4j.js M src/config.js A src/neo4j/.env A src/neo4j/docker-compose.yml A src/neo4j/get-doc-functions.js A src/neo4j/graph-data.js A src/neo4j/neo4j-driver.js A src/neo4j/neo4j-functions.js A src/neo4j/query-strings.js A src/neo4j/starting-neo4j.js A src/neo4j/test-temp-run.js Log Message: ----------- Merge pull request #1127 from PathwayCommons/v0.22.1 V0.22.1 Commit: e10d418adbe68a5268027637672a76fecfea5318 https://github.com/PathwayCommons/factoid/commit/e10d418adbe68a5268027637672a76fecfea5318 Author: Jeffrey <jvw...@gmail.com> Date: 2023-04-03 (Mon, 03 Apr 2023) Changed paths: M .eslintignore M README.md A neo4j-test/add-nodes-edges.js M neo4j-test/connect-neo4j.js A neo4j-test/doc-tests-complex.js A neo4j-test/doc-tests.js A neo4j-test/doct_tests_1.json A neo4j-test/document/complex_tests_1.json A neo4j-test/document/complex_tests_2.json A neo4j-test/document/complex_tests_3.json A neo4j-test/document/complex_tests_4.json A neo4j-test/document/complex_tests_5.json A neo4j-test/document/complex_tests_6.json A neo4j-test/document/doct_tests_1.json A neo4j-test/document/doct_tests_2.json A neo4j-test/document/doct_tests_3.json A neo4j-test/document/doct_tests_4.json A neo4j-test/document/doct_tests_5.json A neo4j-test/document/testDoc.json R neo4j-test/example.js A neo4j-test/fixtures.js A neo4j-test/search-tests.js M package-lock.json M package.json M src/config.js M src/model/document/document.js M src/neo4j/.env M src/neo4j/docker-compose.yml M src/neo4j/get-doc-functions.js A src/neo4j/index.js A src/neo4j/neo4j-document.js M src/neo4j/neo4j-functions.js M src/neo4j/query-strings.js R src/neo4j/starting-neo4j.js A src/neo4j/test-functions.js R src/neo4j/test-temp-run.js M src/server/routes/api/document/index.js A src/server/routes/api/document/p-limit.js A test/data/document.json M test/document.js Log Message: ----------- Merge pull request #1162 from PathwayCommons/v0.23.0 V0.23.0 Commit: ace55bf0a77c3080897a42a2c658e9623af748cd https://github.com/PathwayCommons/factoid/commit/ace55bf0a77c3080897a42a2c658e9623af748cd Author: Max Franz <maxkfr...@gmail.com> Date: 2023-05-19 (Fri, 19 May 2023) Changed paths: M package-lock.json M src/client/components/editor/info-panel.js M src/client/components/element-info/entity-info.js M src/client/components/element-info/interaction-info.js M src/styles/editor/editor.css Log Message: ----------- Show 'coming soon' message for articles in the explorer w/o PubMed data Also: Workaround for the context info overlapping the figure. #1050 Commit: d70ca675e86e7792a5e9e227196d1edbfc14f534 https://github.com/PathwayCommons/factoid/commit/d70ca675e86e7792a5e9e227196d1edbfc14f534 Author: Max Franz <maxkfr...@gmail.com> Date: 2023-05-19 (Fri, 19 May 2023) Changed paths: M package-lock.json M src/client/components/editor/info-panel.js M src/client/components/element-info/entity-info.js M src/client/components/element-info/interaction-info.js M src/styles/editor/editor.css Log Message: ----------- Merge pull request #1183 from PathwayCommons/no-pubmed-data-fix Show 'coming soon' message for articles in the explorer w/o PubMed data Commit: 8481ce33c91f048b1581d6b2c395e2cb922d06ad https://github.com/PathwayCommons/factoid/commit/8481ce33c91f048b1581d6b2c395e2cb922d06ad Author: Max Franz <maxkfr...@gmail.com> Date: 2023-05-19 (Fri, 19 May 2023) Changed paths: M package-lock.json M package.json Log Message: ----------- 0.23.1 Commit: 18f0f7b17fa885301b6b11785a6f42290cdb6f97 https://github.com/PathwayCommons/factoid/commit/18f0f7b17fa885301b6b11785a6f42290cdb6f97 Author: Max Franz <maxkfr...@gmail.com> Date: 2023-05-19 (Fri, 19 May 2023) Changed paths: M package-lock.json M package.json Log Message: ----------- Merge pull request #1184 from PathwayCommons/releasev0.23.1 Release v0.23.1 Commit: 5e29a9438e82e9f390ebe5f05baa4a52a9459795 https://github.com/PathwayCommons/factoid/commit/5e29a9438e82e9f390ebe5f05baa4a52a9459795 Author: Jeffrey Wong <jvw...@gmail.com> Date: 2023-07-04 (Tue, 04 Jul 2023) Changed paths: A .env M README.md A docker-compose.yml R neo4j-test/add-nodes-edges.js R neo4j-test/connect-neo4j.js R neo4j-test/doc-tests-complex.js R neo4j-test/doc-tests.js R neo4j-test/doct_tests_1.json R neo4j-test/document/complex_tests_1.json R neo4j-test/document/complex_tests_2.json R neo4j-test/document/complex_tests_3.json R neo4j-test/document/complex_tests_4.json R neo4j-test/document/complex_tests_5.json R neo4j-test/document/complex_tests_6.json R neo4j-test/document/doct_tests_1.json R neo4j-test/document/doct_tests_2.json R neo4j-test/document/doct_tests_3.json R neo4j-test/document/doct_tests_4.json R neo4j-test/document/doct_tests_5.json R neo4j-test/document/testDoc.json R neo4j-test/fixtures.js R neo4j-test/search-tests.js M package-lock.json M package.json M src/client/components/element-info/entity-assoc-display.js M src/client/components/element-info/entity-info.js M src/config.js M src/model/element/entity-type.js M src/model/element/entity.js R src/neo4j/.env R src/neo4j/docker-compose.yml R src/neo4j/get-doc-functions.js R src/neo4j/graph-data.js M src/neo4j/index.js M src/neo4j/neo4j-document.js M src/neo4j/neo4j-driver.js M src/neo4j/neo4j-functions.js M src/neo4j/query-strings.js M src/neo4j/test-functions.js M src/server/index.js A src/server/routes/api/document/graphdb.js M src/server/routes/api/document/index.js M src/server/routes/api/document/indra.js M src/server/routes/api/document/update.js M src/server/update-cron.js A test/neo4j-test/add-nodes-edges.js A test/neo4j-test/connect-neo4j.js A test/neo4j-test/doc-tests-complex.js A test/neo4j-test/doc-tests.js A test/neo4j-test/document/complex_tests_1.json A test/neo4j-test/document/complex_tests_2.json A test/neo4j-test/document/complex_tests_3.json A test/neo4j-test/document/complex_tests_4.json A test/neo4j-test/document/complex_tests_5.json A test/neo4j-test/document/complex_tests_6.json A test/neo4j-test/document/doct_tests_1.json A test/neo4j-test/document/doct_tests_2.json A test/neo4j-test/document/doct_tests_3.json A test/neo4j-test/document/doct_tests_4.json A test/neo4j-test/document/doct_tests_5.json A test/neo4j-test/document/testDoc.json A test/neo4j-test/fixtures.js A test/neo4j-test/search-tests.js Log Message: ----------- merge conflicts Commit: 0daaca2be4ce20c3c73fc158edb5c617b644bebc https://github.com/PathwayCommons/factoid/commit/0daaca2be4ce20c3c73fc158edb5c617b644bebc Author: Jeffrey <jvw...@gmail.com> Date: 2023-12-06 (Wed, 06 Dec 2023) Changed paths: M README.md M package-lock.json M package.json M src/client/components/document-management-components.js M src/client/components/editor/cy/layout.js M src/client/components/editor/info-panel.js M src/client/components/home.js M src/client/components/request-form.js M src/config.js A src/server/routes/api/document/crossref/api.js A src/server/routes/api/document/crossref/index.js A src/server/routes/api/document/crossref/map.js A src/server/routes/api/document/crossref/works.js M src/server/routes/api/document/index.js M src/server/routes/api/document/pubmed/index.js M src/server/routes/api/document/update.js M src/server/routes/index.js M src/server/update-cron.js M src/styles/editor/editor.css M src/util/is.js M src/util/pubmed.js A src/util/time.js A test/crossRef/10.1016_j.molcel.2019.06.008.json A test/crossRef/10.1101_2022.09.28.22280453.json A test/crossRef/10.1101_2023.04.12.536510.json A test/crossRef/10.3030_101067344.json A test/crossRef/10.7554_eLife.68292.json A test/crossRef/10.7554_eLife.87468.2.json A test/crossRef/10.7554_eLife.87468.2_noabstract.json A test/crossRef/work_query_1.json A test/crossRef/work_query_2.json A test/crossRef/work_query_3.json A test/crossRef/work_query_4.json A test/crossRef/work_query_5.json A test/crossRef/works.js A test/crossref/map.js M test/neo4j-test/doc-tests-complex.js M test/neo4j-test/doc-tests.js M test/neo4j-test/search-tests.js Log Message: ----------- Merge pull request #1231 from PathwayCommons/v0.25.0 v0.25.0 Commit: 853b507ceebd4cffc98cb49505b4b06ecebbe5aa https://github.com/PathwayCommons/factoid/commit/853b507ceebd4cffc98cb49505b4b06ecebbe5aa Author: Jeffrey <jvw...@gmail.com> Date: 2024-02-02 (Fri, 02 Feb 2024) Changed paths: M package-lock.json M package.json M src/client/components/document-management-components.js M src/model/document/document.js M src/server/routes/api/document/crossref/map.js Log Message: ----------- Merge pull request #1244 from PathwayCommons/v0.26.0 v0.26.0 Commit: 1cbdeeef3a2c51f4b2d43b410720bb9e8482f178 https://github.com/PathwayCommons/factoid/commit/1cbdeeef3a2c51f4b2d43b410720bb9e8482f178 Author: Jeffrey Wong <jvw...@gmail.com> Date: 2024-03-20 (Wed, 20 Mar 2024) Changed paths: M package-lock.json M src/client/components/element-info/entity-info.js Log Message: ----------- Merge branch 'master' into diff-master Compare: https://github.com/PathwayCommons/factoid/compare/3c82d53137ca...1cbdeeef3a2c To unsubscribe from these emails, change your notification settings at 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