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[cytoscape/cytoscape.js] 974fcf: GH Actions tests run on all push and pull_request
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 405ff2: Bump logback-core from 0.9.29 to 1.2.9 in /integra...
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] c36e45: Clean up psi dependencies
'Scooter Morris' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] d24303: Update install4j config to remove Info.plist modif...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] e238e6: CYTOSCAPE-12858 Two fixes. First, ding and the ta...
'Scooter Morris' via cytoscape-cvs
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[cytoscape/cytoscape-impl] d8fdef: CYTOSCAPE-12858 Can't use "==" with modifiers. In...
'Scooter Morris' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 792528: CYTOSCAPE-12929 Added support for automatic label ...
'Scooter Morris' via cytoscape-cvs
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[cytoscape/cytoscape-api] cdb52b: CYTOSCAPE-12929 Added support for automatic label ...
'Scooter Morris' via cytoscape-cvs
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[cytoscape/cytoscape.js] 56fdab: Update tests badge to GH actions
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 29d5ca: Update install4j config to move 'java.io.tmpdir' t...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 59fa56: Make sure Font loading exception doesn't get swall...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape.js] cb5cd4: Bump async from 2.6.3 to 2.6.4
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape-admin-scripts] e28d3d: added more if statements in the grant clean up fun...
'Chris Churas' via cytoscape-cvs
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[cytoscape/cytoscape-admin-scripts] c61840: added a note about where the log files are located
'Chris Churas' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 6ec20b: CYTOSCAPE-12393 Visual property for node/edge labe...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-api] 5e750b: CYTOSCAPE-12393 Visual property for node/edge labe...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 7efab0: CYTOSCAPE-12977 New commands for view export formats.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] f96200: New shape is now correctly selected ("Appearance" ...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] d7a9eb: More useful range of font sizes for Text annotatio...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] a078d8: CYTOSCAPE-12588 Return of node selection lasso.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 4c648e: Fix jitteryness of group node resizing.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 02a890: CYTOSCAPE-12957 Don't clear EDGE_BEND when applyin...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 3b2a5f: Temp fix for missing ebi repository.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] bbef40: Minor code reformatting and cleanup.
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 606599: Fixes a ClassCastException when trying to move a G...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] c6c673: Fixes GroupAnnotationImpl.changeCanvas() and setCa...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] cca70d: Annotations now fire a 'canvas' PropertyChangeEven...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 88f7a0: Fixes incorrect tunable title.
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 4bdedf: The "New Network From Selection" tasks now copy Cy...
'Christian Lopes' via cytoscape-cvs
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[PathwayCommons/factoid] b56c4a: Make the cron update the author profiles.
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-api] 56823b: Minor update to Javadocs.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 33639a: CYTOSCAPE-12914 Copy/paste of annotations supports...
'Mike Kucera' via cytoscape-cvs
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[PathwayCommons/factoid] 365ea6: Document the new methods
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 5f6c0a: Uncomment
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 9ecc37: Minor refactoring.
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] f8154d: Also, we should not use synchronized blocks in met...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 9283da: Removes all components from the EditDialog when di...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape.js] 734462: Add 3.21.1 and 3.20.2 to the list of releases in t...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 4d1078: CYTOSCAPE-12950 Handle mapping column exists but i...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 060964: # WARNING: head commit changed in the meantime
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 941338: ListSingleHandler.update() updates its combobox mo...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape.js] 9a2231: Update README.md
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] a935e6: Updates
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] a7c8b3: Add 3.21.1 and 3.20.2 to the list of releases in t...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] b0528b: Don't release docs for backport 3.20 releases
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 0b51f6: Merge pull request #2997 from mkelly1495/fix-css-s...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 801fdf: Merge pull request #2997 from mkelly1495/fix-css-s...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 1e0cd0: Fix css class selector.
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] a0b85c: Merge pull request #3002 from zakjan/include-under...
'Max Franz' via cytoscape-cvs
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[PathwayCommons/factoid] e29cff: Catch any mangled ORCIDs in PubMed records correctly.
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] a24d09: - utilize PubMed ORCID information
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape.js] 297e8a: Merge pull request #3002 from zakjan/include-under...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] ab2254: Include underlay into bounding box
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 215052: Fix markdown issues in docs (probably re. previous...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 7bc95c: Fix markdown issues in docs (probably re. previous...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 490e3d: CYTOSCAPE-12960 Add 'handleEquations' parameter to...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 589ab9: CYTOSCAPE-12961 Improve network auto naming.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] ae2971: Minor refactoring.
'Mike Kucera' via cytoscape-cvs
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[PathwayCommons/factoid] 0e7381: Add the ORCID website url
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 35686f: Add the config variable for the public ORCID API
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] d7dcab: Merge pull request #1063 from PathwayCommons/iss10...
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] d6ac2f: Use ISO_8601 representation for lastmod
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 815558: Revert the last changes--this should also fix the ...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 74d65b: CYTOSCAPE-12964 Image export uses high detail, but...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape.js] 8bf3b9: Add automated tests GH action config file to master
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] f6bdb5: Add missing checkbox to bug report template
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 9c4cfc: Bump ansi-regex from 3.0.0 to 3.0.1
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] c2ef40: Streamline contributing & reviewer information & a...
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-impl] b5efff: Fixes bug where the Edge table was selected by def...
'Christian Lopes' via cytoscape-cvs
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[PathwayCommons/factoid] f38c02: 0.20.0
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 816be9: CYTOSCAPE-12382 Ensure PDF export preserves italic...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape.js] 62515f: Bump minimist from 1.2.5 to 1.2.6
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 33befe: CYTOSCAPE-12926 Fix custom graphics size when node...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] dd17b6: Fixes bug where an annotation may not be editable ...
'Christian Lopes' via cytoscape-cvs
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[PathwayCommons/factoid] 4c0577: Extract entityNames where used (complex).
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 59af0f: CYTOSCAPE-12964 Add 'high detail' option to image ...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-api] 5471fd: CYTOSCAPE-12964 Add RenderingEngine.printCanvas(Gr...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] f1dde4: Update windows installer with java 17 bundle.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 926ecd: CYTOSCAPE-12963 Delete log files after 30 days.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 3ecc30: Minor code refactoring and formatting (CYTOSCAPE-1...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] f20e8a: Fixes bug where the width and height of a Bounded ...
'Christian Lopes' via cytoscape-cvs
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[PathwayCommons/factoid] 88a429: Bump image cache size.
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] fd0176: Cleanup the handler logic
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 18a4a7: Add a secondary index for the doc 'status'
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 84a58e: CYTOSCAPE-12924 Fix layout settings "Reset Default...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] c90434: CYTOSCAPE-12956 Properly clear tooltip from InputH...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 398d71: Put a search icon in the table browser.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] ad908d: Clicking and dragging the scrollbar handle in the ...
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] a6aabe: Fixes a NPE -- ref #12940
'Christian Lopes' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 00d5b9: Custom Graphics no longer resets the color palette...
'Christian Lopes' via cytoscape-cvs
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[PathwayCommons/factoid] c71a62: - Accept limit 'Infinity' interpret as all docs
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] f94cf9: Remove the article from the document JSON.
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-api] d166f9: Minor update to javadocs.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 2830b9: Remove search-impl.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 0693da: Remove search-impl from features. Remove lucene 3 ...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 2fe700: Add search2-impl bundle to features.
'Mike Kucera' via cytoscape-cvs
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[PathwayCommons/factoid] d3fbd8: Use node-cache for implementation of doc caching
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 335a58: Upgrade to install4j 9.0.6. Support for mac aarch6...
'Mike Kucera' via cytoscape-cvs
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[PathwayCommons/factoid] dd45de: Set the doc cache expiry period
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] a7df0b: Better responsiveness of search box on mobile
'Max Franz' via cytoscape-cvs
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[PathwayCommons/factoid] 7e35c3: Cache the entire response when no param values are...
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] f18e66: Up limit to 150 docs in search for test.
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 5a4c20: Preprocessing minisearch for authors and entities.
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 7b22b3: - Index more useful fields like pmid, doi, caption
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 88c65b: Merge branch 'iss937_interaction-info' into test-s...
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 49b87e: Refactoring to allow individual tables to be searc...
'Mike Kucera' via cytoscape-cvs
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[PathwayCommons/factoid] 1e52c8: - only update documents with a provided paper Id (...
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 7af714: Typo in filter for filtering documents with missin...
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 22fec8: Use stable INDRA endpoint.
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 78df36: Remove test sleep.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape.js] 2a88bd: Remove build tests
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 3c62ec: Add a test workflow
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-impl] c4d33f: Reindex when column deleted/renamed.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 05a7a1: Handle adding and deleting of rows.
'Mike Kucera' via cytoscape-cvs
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[PathwayCommons/factoid] 342406: Bump socket.io from 2.1.1 to 2.4.0
'Max Franz' via cytoscape-cvs
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[PathwayCommons/factoid] faa6a8: Bump postcss from 6.0.23 to 7.0.36
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 41a981: Use custom analyzer, use TextField.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape.js] 664981: Bump follow-redirects from 1.14.7 to 1.14.8
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 1b06e7: Bump ajv from 6.10.0 to 6.12.6
'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] 049cd9: Bump handlebars from 4.6.0 to 4.7.7
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] aca2b3: Bump pathval from 1.1.0 to 1.1.1
'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] 1a193e: Bump pathval from 1.1.0 to 1.1.1
'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] 73977e: Bump ua-parser-js from 0.7.17 to 0.7.31
'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] cea94d: Bump undefsafe from 2.0.2 to 2.0.5
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 53f1c0: Bump follow-redirects from 1.11.0 to 1.14.7
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 9ff7c1: Updates
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 704846: Bump browserslist from 4.6.6 to 4.19.1
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 82ba8e: Bump lodash from 4.17.15 to 4.17.21
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 11af22: Add example network to readme
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 028855: Updates
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] b30546: Build 3.20.1
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 7dd13e: Bump follow-redirects from 1.11.0 to 1.14.7
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 5512a0: Bump lodash from 4.17.15 to 4.17.21
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 2bfaad: Bump browserslist from 4.6.6 to 4.19.1
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] f8ec55: allow paths for get and set data field
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 8dc47f: Change JSON returns when there is an error to retu...
'Scooter Morris' via cytoscape-cvs
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[cytoscape/cytoscape.js] 3cae87: Add depthSort option to breadthfirst layout
'Max Franz' via cytoscape-cvs
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[PathwayCommons/factoid] df82dc: Bump cached-path-relative from 1.0.2 to 1.1.0
'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] a068e7: Bump node-fetch from 2.6.1 to 2.6.7
'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] c8445b: Bump postcss from 6.0.23 to 8.2.13
'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] 07dec8: 0.19.0
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] a125dd: Remove any delay in export of different types.
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] 4aea52: Start of search2-impl bundle.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape.js] e5110a: Find negative weight cycles on Bellman-Ford
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape] a158fe: Update README.md
'Alexander Pico' via cytoscape-cvs
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[cytoscape/cytoscape] 637527: Update README.md
'Alexander Pico' via cytoscape-cvs
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[PathwayCommons/factoid] 622730: Bump node-fetch from 2.6.1 to 3.1.1
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 9293ed: Update cy-rest to 3.12.3.
'Mike Kucera' via cytoscape-cvs
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[PathwayCommons/factoid] ab0077: Extract the logic from the endpoints for json, bio...
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] c2125c: Fixes for karaf and karaf.bat replacement lines
'Scooter Morris' via cytoscape-cvs
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[PathwayCommons/factoid] 920d5f: Create exports when in production OR there is a mi...
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-impl] dc1806: Change JSON returns when there is an error to retu...
'Scooter Morris' via cytoscape-cvs
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[PathwayCommons/factoid] 3a8b7f: Log errors in handler for zip downloads.
'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] fc7923: db capability to arbitrarily index table
'Jeffrey' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 51ecdb: Revert changes to install4j for karaf 4.2.14, set ...
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 2ae4ee: Fix typo in assembly pom.xml
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 6a3f37: Set karaf back to 4.2.8, set pax-logging to 1.11.13.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-parent] 6d4628: Set karaf back to 4.2.8, set pax-logging to 1.11.13
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape.js] aa5336: Bump marked from 1.0.0 to 4.0.10
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] a941de: Bump follow-redirects from 1.11.0 to 1.14.7
'dependabot[bot]' via cytoscape-cvs
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[cytoscape/cytoscape.js] 03864c: Compound dragging amendments:
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 74f716: Compound dragging amendments:
'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] c0f3c0: bumped diffusion version to 1.6.3 which depends on...
'Chris Churas' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] cff7f7: Update install4j config again.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 51aa00: Update install4j config.
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-gui-distribution] 420e0a: Set cy-rest version to 3.12.3
'Mike Kucera' via cytoscape-cvs
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[cytoscape/cytoscape-support] 346abc: CYTOSCAPE-12944: Update to pax-logging 1.11.12 and...
'Scooter Morris' via cytoscape-cvs