> just to add - I've known some sources to become unstable with multiple > accessions. I seem to remember that In jDas, Leyla implemented a > fallback where for sources that threw errors with multiple accessions, > it would instead make a series of single identifier requests. >>> My second question: >>> I have loaded all uniprot annotations as one single GFF file. >>> http://www.uniprot.org/uniprot/?query=reviewed%3ayes&force=yes&format=gff >>> >>> Is it possible to load such GFF file for other services using >>> uniprot-identifiers? > Ah - I think you are asking if any other DAS sources can serve GFF. > Generally - no. However, it very much depends on the server > implementation. I don't remember if any of the standard servers > officially support GFF download, although I know that has been requested > at DAS meetings.. and I seem to remember that Dazzle had a switch for GFF. > > Jim
Hi Jim, many thanks for this valuable information. I have not yet measured the time but indeed it feels faster for multiple requests. I like the idea of having a fall back as implemented by Leyla. I am looking fwd to c U on the Vizbi Cheers Christoph _______________________________________________ DAS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/das
