Greetings deal.II users: I am trying to get step-36 with SLEPc up and running with the Intel Compilers/MKL on a linux cluster. Everything compiles and link ok, but when I run step-36, I'm greeted with the familiar "corrupt argument" message from PETSc.
The 'make test' for my PETSc and SLEPc installations work just fine, and an identical build, except with gcc-4.5 and OpenMPI on another machine (so same versions of PETSc, SLEPc, deal.II) works just fine. Has anyone out been successful with step-36 and Intel products? From the error I'm getting, it seems like there may be a difference in the Intel and GNU implementation of a function somewhere, which is causing incorrect sized/initialized objects to be passed to the solver. Has anyone run into an issue like this before? Thanks, Jon Pitt ----------------- The Error: Number of active cells: 1024 Number of degrees of freedom: 1089 [0]PETSC ERROR: Petsc_DelComm() line 430 in src/sys/objects/pinit.c [0]PETSC ERROR: PetscSubcommCreate_interlaced() line 288 in src/sys/objects/subcomm.c [0]PETSC ERROR: PetscSubcommSetType() line 71 in src/sys/objects/subcomm.c [0]PETSC ERROR: PCSetUp_Redundant() line 77 in src/ksp/pc/impls/redundant/redundant.c [0]PETSC ERROR: PCSetUp() line 819 in src/ksp/pc/interface/precon.c [0]PETSC ERROR: KSPSetUp() line 260 in src/ksp/ksp/interface/itfunc.c [0]PETSC ERROR: STSetUp_Shift() line 94 in src/st/impls/shift/shift.c [0]PETSC ERROR: STSetUp() line 269 in src/st/interface/stsolve.c [0]PETSC ERROR: EPSSetUp() line 155 in src/eps/interface/setup.c [0]PETSC ERROR: EPSSolve() line 122 in src/eps/interface/solve.c [0]PETSC ERROR: --------------------- Error Message ------------------------------------ [0]PETSC ERROR: Corrupt argument: see http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind! [0]PETSC ERROR: Outer MPI_Comm -2080374782 does not have expected reference to inner comm -2080374781, problem with corrupted memory! [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Petsc Release Version 3.2.0, Patch 5, Sat Oct 29 13:45:54 CDT 2011 [0]PETSC ERROR: See docs/changes/index.html for recent updates. [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. [0]PETSC ERROR: See docs/index.html for manual pages. [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: ./step-36 on a arch-linu named g046 by jsp203 Tue Dec 6 12:14:40 2011 [0]PETSC ERROR: Libraries linked from /software/ARL/deal.II/external/petsc-3.2-p5/arch-linux2-cxx-debug/lib [0]PETSC ERROR: Configure run at Tue Dec 6 11:45:59 2011 [0]PETSC ERROR: Configure options --with-threads=0 --with-clanguage=cxx --with-shared-libraries=1 --with-dynamic-loading=1 --with-fortran=1 --download-hypre=1 --with-cxx=mpiicpc --with-cc=mpiicc --with-fc=mpiifort --with-blas-lapack-dir=/software/intel/mkl/10.2.3.029/lib/em64t [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: PetscCommDestroy() line 246 in src/sys/objects/tagm.c [0]PETSC ERROR: PetscSubcommDestroy() line 133 in src/sys/objects/subcomm.c [0]PETSC ERROR: PCDestroy_Redundant() line 243 in src/ksp/pc/impls/redundant/redundant.c [0]PETSC ERROR: PCDestroy() line 119 in src/ksp/pc/interface/precon.c [0]PETSC ERROR: KSPDestroy() line 755 in src/ksp/ksp/interface/itfunc.c [0]PETSC ERROR: STDestroy() line 161 in src/st/interface/stfunc.c [0]PETSC ERROR: EPSDestroy() line 682 in src/eps/interface/basic.c terminate called after throwing an instance of 'dealii::SLEPcWrappers::SolverBase::ExcSLEPcError' what(): -------------------------------------------------------- An error occurred in line <44> of file </software/ARL/deal.II/svn-gale/source/lac/slepc_solver.cc> in function dealii::SLEPcWrappers::SolverBase::SolverData::~SolverData() The violated condition was: ierr == 0 The name and call sequence of the exception was: ExcSLEPcError(ierr) Additional Information: An error with error number 64 occured while calling a SLEPc function -------------------------------------------------------- Aborted
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