Paras:
deal.II 9.0.1 is nearly 3 years old and it's unlikely that anyone will spend
the time to figure out in detail what the issue is. I would suggest upgrading
to a more recent version and seeing whether the problem persists.
That said, this...
cd /home/woody/iwtm/iwtm020h/trial-code/MNC-Frac/_build/variants
and this...
/home/woody/iwtm/iwtm020h/spack-install/dealii901-spackv15-gcc/spack/opt/spack/linux-centos7-ivybridge/gcc-7.3.0/cmake-3.17.3-yp7x4tfykdwkolbguxb2nbd46ktt5e6h/bin/cmake
and this...
-E cmake_link_script CMakeFiles/cookmembranedistributed.dir/link.txt --verbose=1
/home/woody/iwtm/iwtm020h/spack-install/dealii901-spackv15-gcc/spack/opt/spack/linux-centos7-ivybridge/gcc-7.3.0/openmpi-3.1.6-6d7xi6tah53fltt3wtens3wt6zoaysr7/bin/mpic++
-rdynamic -rdynamic -fuse-ld=gold -ggdb
CMakeFiles/cookmembranedistributed.dir/cook_membrane_distributed/CookMembraneDistributed.cc.o
CMakeFiles/cookmembranedistributed.dir/cook_membrane_distributed/CookMembraneDistributedMain.cc.o
-o cookmembranedistributed
-Wl,-rpath,/home/woody/iwtm/iwtm020h/trial-code/MNC-Frac/_build
/home/woody/iwtm/iwtm020h/spack-install/dealii901-spackv15-gcc/spack/opt/spack/linux-centos7-ivybridge/gcc-7.3.0/dealii-9.0.1-dealii-901-dev-mzkyyfiqp2zxw4ip4cuyx7ok6ym57bp7/lib/libdeal_II.g.so.9.0.1
../libmncfrac.so
/home/woody/iwtm/iwtm020h/spack-install/dealii901-spackv15-gcc/spack/opt/spack/linux-centos7-ivybridge/gcc-7.3.0/dealii-9.0.1-dealii-901-dev-mzkyyfiqp2zxw4ip4cuyx7ok6ym57bp7/lib/libdeal_II.g.so.9.0.1
-ltbb_debug -lboost_iostreams-mt -lboost_serialization-mt -lboost_system-mt
-lboost_thread-mt -lboost_regex-mt -lboost_chrono-mt -lboost_date_time-mt
-lboost_atomic-mt -lmuelu-adapters -lmuelu-interface -lmuelu -lifpack2
-lanasazitpetra -lModeLaplace -lanasaziepetra -lanasazi -lmapvarlib -lsuplib
-lsuplib_c -lsuplib_cpp -lsupes -laprepro_lib -lio_info_lib -lIonit -lIotr
-lIohb -lIogs -lIogn -lIovs -lIoexo_fac -lIopx -lIofx -lIoex -lIoss -lnemesis
-lexoIIv2for32 -lexodus_for -lexodus -lamesos2 -lbelosxpetra -lbelostpetra
-lbelosepetra -lbelos -lml -lifpack -lzoltan2 -lamesos -lgaleri-xpetra
-lgaleri-epetra -laztecoo -lxpetra-sup -lxpetra -ltrilinosss -ltpetraext
-ltpetrainout -ltpetra -lkokkostsqr -ltpetraclassiclinalg
-ltpetraclassicnodeapi -ltpetraclassic -lepetraext -ltriutils -lzoltan
-lepetra -lsacado -lkokkoskernels -lteuchoskokkoscomm -lteuchoskokkoscompat
-lteuchosremainder -lteuchosnumerics -lteuchoscomm -lteuchosparameterlist
-lteuchosparser -lteuchoscore -lkokkosalgorithms -lkokkoscontainers
-lkokkoscore -lgtest -lmatio -ldmumps -lmumps_common -lpord -lumfpack
-lcholmod -lccolamd -lcolamd -lcamd -lsuitesparseconfig -lamd -lrt -ladolc
-lparpack -larpack -lassimp -lgsl -lgslcblas -lmuparser -lnetcdf_c++ -lnetcdf
-lTKBO -lTKBool -lTKBRep -lTKernel -lTKFeat -lTKFillet -lTKG2d -lTKG3d
-lTKGeomAlgo -lTKGeomBase -lTKHLR -lTKIGES -lTKMath -lTKMesh -lTKOffset
-lTKPrim -lTKShHealing -lTKSTEP -lTKSTEPAttr -lTKSTEPBase -lTKSTEP209 -lTKSTL
-lTKTopAlgo -lTKXSBase -lp4est -lsc -lscalapack -lslepc -lpetsc -lHYPRE
-lsuperlu_dist -lopenblas -lhdf5hl_fortran -lhdf5_hl -lhdf5_fortran -lhdf5
-lparmetis -lmetis -lz -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh
-lmpi -lgfortran -lm -lpthread -lquadmath -ldl -lsundials_idas
-lsundials_arkode -lsundials_kinsol -lsundials_nvecserial -lsundials_nvecparallel
...are the commands that trigger the error. You can execute them by hand on
the command line, and test your hypothesis about the order of libraries by
switching what needs to be switched.
Best
W.
--
------------------------------------------------------------------------
Wolfgang Bangerth email: bange...@colostate.edu
www: http://www.math.colostate.edu/~bangerth/
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