Your message dated Wed, 05 Mar 2008 13:47:05 +0000 with message-id <[EMAIL PROTECTED]> and subject line Bug#419070: fixed in openbabel 2.1.1-4 has caused the Debian Bug report #419070, regarding openbabel: core dumped when convert a gaussian input file to tinker xyz to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [EMAIL PROTECTED] immediately.) -- 419070: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=419070 Debian Bug Tracking System Contact [EMAIL PROTECTED] with problems
--- Begin Message ---Package: openbabel Version: 2.0.2-1 Severity: normal input file in attachment $ babel -icom 2.001.gjf -otxyz 2.001.txyz Segmentation fault (core dumped) -- System Information: Debian Release: 4.0 APT prefers feisty APT policy: (500, 'feisty') Architecture: amd64 (x86_64) Shell: /bin/sh linked to /bin/bash Kernel: Linux 2.6.20-14-generic Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Versions of packages openbabel depends on: ii libc6 2.5-0ubuntu12 GNU C Library: Shared libraries ii libgcc1 1:4.1.2-0ubuntu4 GCC support library ii libopenbabel1 2.0.2-1 Convert and manipulate chemical da ii libstdc++6 4.1.2-0ubuntu4 The GNU Standard C++ Library v3 ii zlib1g 1:1.2.3-13ubuntu4 compression library - runtime openbabel recommends no packages. -- no debconf information#P B3LYP/6-31G* OPT notitle 0,1 N,-0.6758349567,2.056926151,-1.411633702 C,-0.6818881591,3.3055950727,-0.5862203904 C,-0.3543225455,3.0598869219,0.905534406 O,-1.0913649229,3.5329165247,1.7604640953 H,-1.3163605643,1.3333223863,-1.0268951168 H,0.3206859345,1.6386296231,-1.4661621927 H,-0.9606934494,2.215277992,-2.382757541 H,0.0460206302,3.992099258,-1.0289784187 H,-1.6741765604,3.7546603,-0.6203644093 N,0.7845859823,2.360812289,1.1403930883 C,1.1943554006,1.9797891259,2.4858059017 C,0.8861218896,0.4996614957,2.7655768122 O,0.0009043983,0.1694402343,3.5658448281 H,1.3475435429,2.0141956457,0.3478501652 H,2.2662758162,2.1769436215,2.6037597477 H,0.6298567687,2.5759410415,3.2022260164 N,1.6098084722,-0.3976086223,2.0576091068 C,1.3534250527,-1.8317256939,2.1361671564 C,0.1082487413,-2.2466706236,1.3369540487 O,0.1656480197,-2.9515370108,0.3203631363 H,2.2533947151,-0.1160846606,1.304672896 H,2.2080788713,-2.3528604937,1.7058446311 H,1.230928517,-2.1193172026,3.1857946485 N,-1.0602426706,-1.7597589136,1.8212362028 C,-2.3003385974,-1.933461569,1.0845500961 C,-2.2397963521,-1.2124059748,-0.26855408 O,-2.3415731276,0.0168906526,-0.3454715703 H,-1.0060254844,-1.0961682327,2.5989696686 H,-2.5105380105,-3.0000190264,0.9505360592 H,-3.1083040389,-1.4854006795,1.665832174 N,-2.0624718225,-2.0116552386,-1.3482914514 C,-1.8607513865,-1.452101729,-2.6734499099 C,-0.5076588003,-0.7515126345,-2.9148021989 O,-0.4659292807,0.2208286623,-3.6725039162 H,-1.7395750079,-2.9523425209,-1.1569119623 H,-1.9733569117,-2.2560530086,-3.4078615724 H,-2.6335671252,-0.7073098503,-2.8695716061 N,0.5709387758,-1.294881986,-2.3043224577 C,1.9240341076,-0.7542866916,-2.4600997644 C,2.2996483144,0.100874552,-1.2298270709 O,1.8018327326,1.2846875441,-1.1988229494 H,0.4416963789,-1.9948082564,-1.5759564125 H,2.6238630988,-1.5880789157,-2.5522376419 H,1.9313944236,-0.1497487597,-3.3682077855 O,2.9965954307,-0.4159225484,-0.3404144857
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--- Begin Message ---Source: openbabel Source-Version: 2.1.1-4 We believe that the bug you reported is fixed in the latest version of openbabel, which is due to be installed in the Debian FTP archive: libopenbabel-dev_2.1.1-4_i386.deb to pool/main/o/openbabel/libopenbabel-dev_2.1.1-4_i386.deb libopenbabel2_2.1.1-4_i386.deb to pool/main/o/openbabel/libopenbabel2_2.1.1-4_i386.deb openbabel_2.1.1-4.diff.gz to pool/main/o/openbabel/openbabel_2.1.1-4.diff.gz openbabel_2.1.1-4.dsc to pool/main/o/openbabel/openbabel_2.1.1-4.dsc openbabel_2.1.1-4_i386.deb to pool/main/o/openbabel/openbabel_2.1.1-4_i386.deb python-openbabel_2.1.1-4_i386.deb to pool/main/o/openbabel/python-openbabel_2.1.1-4_i386.deb A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [EMAIL PROTECTED], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Daniel Leidert (dale) <[EMAIL PROTECTED]> (supplier of updated openbabel package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [EMAIL PROTECTED]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.7 Date: Tue, 04 Mar 2008 15:22:58 +0100 Source: openbabel Binary: openbabel libopenbabel-dev libopenbabel2 python-openbabel Architecture: source i386 Version: 2.1.1-4 Distribution: unstable Urgency: low Maintainer: Debichem Team <[EMAIL PROTECTED]> Changed-By: Daniel Leidert (dale) <[EMAIL PROTECTED]> Description: libopenbabel-dev - Convert and manipulate chemical data files (development version) libopenbabel2 - Convert and manipulate chemical data files openbabel - Convert and manipulate chemical data files python-openbabel - Convert and manipulate chemical data files (Python binding) Closes: 419070 Changes: openbabel (2.1.1-4) unstable; urgency=low . * debian/patches/babel_1_macro_fix.patch: Added. - doc/babel.1: Fix manpage-has-errors-from-man lintian warning. * debian/patches/fix_419070_segfault_reading_writeonly.patch: Added. - tools/babel.cpp (main): Fix a segmentation fault when trying to convert a Gaussian input file (closes: #419070). The fix has been backported from upstream SVN (revision 2073 and 2074). Files: c91be3e96d0801859c4ce681d05fb5aa 1021 science optional openbabel_2.1.1-4.dsc f65d68abfea1248fad44927a2b9312b3 11404 science optional openbabel_2.1.1-4.diff.gz 1987495eb44dd2ab860f63c9da0b8cef 225296 science optional openbabel_2.1.1-4_i386.deb 3baff195302857adade35bfaddeef7d1 14608674 libdevel optional libopenbabel-dev_2.1.1-4_i386.deb 4ca0f4da959da8f1cde3d577204e8247 2744402 libs optional libopenbabel2_2.1.1-4_i386.deb df8307735d772de411c4439999c4b2d8 1287924 python optional python-openbabel_2.1.1-4_i386.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.2.1 (GNU/Linux) iD8DBQFHzqIamHaJYZ7RAb8RAtgXAJ4ig3ddNpvmmpMfnNn+hkr8P7KLZQCgxgn0 iNbNMXnMJqRXitNZj5Nz2U8= =Amo4 -----END PGP SIGNATURE-----
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