Your message dated Sat, 26 Apr 2008 15:02:05 +0000 with message-id <[EMAIL PROTECTED]> and subject line Bug#478034: fixed in pymol 1.1~beta3-3 has caused the Debian Bug report #478034, regarding pymol: FTBFS on arm/armel with gcc-4.3; please build with gcc-4.2 there to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [EMAIL PROTECTED] immediately.) -- 478034: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=478034 Debian Bug Tracking System Contact [EMAIL PROTECTED] with problems
--- Begin Message ---Package: pymol Version: 1.1~beta3-2 Severity: serious User: [EMAIL PROTECTED] Usertags: goal-python2.5 Tags: patch Hello. pymol FTBFS on arm and armel because gcc-4.3 ICEs, seemingly due to -funroll-loops (#476460). This is blocking the python 2.5 transition, and in #debian-release Aurelien agreed that building on those architectures with gcc-4.2 was an acceptable workaround. I'm attaching a patch, I would be very grateful if you could upload soon, or gave permision to make an upload myself. Thanks in advance, P.S.: I'm build-depending on g++-4.2 and not gcc-4.2 because there seems to be an invocation to g++ in the build process, and I thought "better safe than sorry", so it'd probably work with g++-4.3, I think. -- Adeodato Simó dato at net.com.org.es Debian Developer adeodato at debian.org Listening to: Placebo - Hang On To Your IQdiff -u -r pymol-1.1~beta3.orig/debian/control pymol-1.1~beta3/debian/control --- pymol-1.1~beta3.orig/debian/control 2008-04-26 15:31:03.000000000 +0200 +++ pymol-1.1~beta3/debian/control 2008-04-26 15:33:12.000000000 +0200 @@ -4,7 +4,7 @@ Maintainer: Debichem Team <[EMAIL PROTECTED]> Uploaders: Michael Banck <[EMAIL PROTECTED]>, LI Daobing <[EMAIL PROTECTED]> -Build-Depends: debhelper (>= 5), dpatch, python-dev, python-numeric, glutg3-dev, libpng12-0-dev, tk8.4-dev, libfreetype6-dev, python-support (>= 0.4) +Build-Depends: debhelper (>= 5), dpatch, python-dev, python-numeric, glutg3-dev, libpng12-0-dev, tk8.4-dev, libfreetype6-dev, python-support (>= 0.4), g++-4.2 [arm armel] Standards-Version: 3.7.3 Homepage: http://pymol.sourceforge.net Vcs-Browser: http://svn.debian.org/wsvn/debichem/ diff -u -r pymol-1.1~beta3.orig/debian/rules pymol-1.1~beta3/debian/rules --- pymol-1.1~beta3.orig/debian/rules 2008-04-26 15:31:03.000000000 +0200 +++ pymol-1.1~beta3/debian/rules 2008-04-26 15:34:11.000000000 +0200 @@ -2,6 +2,16 @@ # -*- Makefile -*- DEB_BUILD_ARCH=$(shell dpkg-architecture -qDEB_BUILD_ARCH) +DEB_HOST_ARCH=$(shell dpkg-architecture -qDEB_HOST_ARCH) + +GCC43_ICES_HERE := arm armel + +ifneq (,$(filter $(DEB_HOST_ARCH),$(GCC43_ICES_HERE))) + export CC=gcc-4.2 + export CPP=cpp-4.2 + export CXX=g++-4.2 +endif + export PYMOL_PATH=$(CURDIR) PYTHON_VERSION := $(shell pyversions -dv)
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--- Begin Message ---Source: pymol Source-Version: 1.1~beta3-3 We believe that the bug you reported is fixed in the latest version of pymol, which is due to be installed in the Debian FTP archive: pymol_1.1~beta3-3.diff.gz to pool/main/p/pymol/pymol_1.1~beta3-3.diff.gz pymol_1.1~beta3-3.dsc to pool/main/p/pymol/pymol_1.1~beta3-3.dsc pymol_1.1~beta3-3_i386.deb to pool/main/p/pymol/pymol_1.1~beta3-3_i386.deb A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [EMAIL PROTECTED], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Michael Banck <[EMAIL PROTECTED]> (supplier of updated pymol package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [EMAIL PROTECTED]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Sat, 26 Apr 2008 16:07:33 +0200 Source: pymol Binary: pymol Architecture: source i386 Version: 1.1~beta3-3 Distribution: unstable Urgency: low Maintainer: Debichem Team <[EMAIL PROTECTED]> Changed-By: Michael Banck <[EMAIL PROTECTED]> Description: pymol - An OpenGL Molecular Graphics System written in Python Closes: 478034 Changes: pymol (1.1~beta3-3) unstable; urgency=low . [ LI Daobing ] * debian/pymol.desktop: fix lintian info desktop-entry-contains-encoding-key. . [ Michael Banck ] * debian/control (Build-Depends): Added g++-4.2 on arm, armel. * debian/rules: Use g++-4.2 on arm, armel; by Adeodato Simo; closes: #478034. Checksums-Sha1: aece7be6b3162673c86b56e930024a968fdcdc5f 1342 pymol_1.1~beta3-3.dsc ad8c6cef170481ac699ae7f2bb5795ccc367ccba 20889 pymol_1.1~beta3-3.diff.gz 6bf20a08c7fb99f9398ca032c68465f38b168c98 6105718 pymol_1.1~beta3-3_i386.deb Checksums-Sha256: 9f1f72ca956cf6f2b41f312a7842a092512e9b96fceb07ba2df2105ac7644eb4 1342 pymol_1.1~beta3-3.dsc f393ab0dad8b2f4764b25ac7db05dbc19dd68d3313fb63fae3f9271c695a85ba 20889 pymol_1.1~beta3-3.diff.gz 60bddd6552d737a4651128625bbcd431b108cd751425d0bab50cf2488138a6ce 6105718 pymol_1.1~beta3-3_i386.deb Files: 653db0e1ebbd25307c7449d43873a6f6 1342 science optional pymol_1.1~beta3-3.dsc d9548ab7b36b49000b0bc66275eafd97 20889 science optional pymol_1.1~beta3-3.diff.gz 588260277e3f235232be5d0d7db7f2a3 6105718 science optional pymol_1.1~beta3-3_i386.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.2.1 (GNU/Linux) iD8DBQFIEznTmHaJYZ7RAb8RAsMmAJ4kr6+bZ+OA5MMIah1W0s28H1gM/QCfRyhj oJPdOQ08+ut/0dNXvkNml8s= =jjHs -----END PGP SIGNATURE-----
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