Your message dated Tue, 12 Apr 2011 17:49:17 +0000
with message-id <[email protected]>
and subject line Bug#617758: fixed in mmass 3.10.0-1
has caused the Debian Bug report #617758,
regarding mmass: Use default python version instead of hardcoded python2.6
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
617758: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=617758
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: mmass
Version: 3.9.0-1
Severity: wishlist
Tags: patch
User: [email protected]
Usertags: origin-ubuntu natty ubuntu-patch
Hi,
Default python version is python2.7 in Ubuntu and your package contains
hardcoded reference to python2.6. Please use generic python references to make
your package compatible with python2.7.
*** /tmp/tmp5Llizj
In Ubuntu, we've applied the attached patch to achieve the following:
* debian/control: rebuild for python2.7 defaults
- updated b-d on python2.6-dev to python-dev
- deleted hardcoded dependency on python as this is generated by
python:Depends
* debian/rules: use python instead of python2.6
* debian/mass.install: updated to be compatible with python2.7
We thought you might be interested in doing the same (except the maintainer
change that is included in the debdiff but do not apply to Debian obviously).
Thanks,
Fabrice
-- System Information:
Debian Release: squeeze/sid
APT prefers maverick-updates
APT policy: (500, 'maverick-updates'), (500, 'maverick-security'), (500,
'maverick-proposed'), (500, 'maverick')
Architecture: amd64 (x86_64)
Kernel: Linux 2.6.35-28-generic (SMP w/2 CPU cores)
Locale: LANG=es_ES.UTF-8, LC_CTYPE=es_ES.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
diff -Nru mmass-3.9.0/debian/control mmass-3.9.0/debian/control
--- mmass-3.9.0/debian/control 2011-01-14 23:00:36.000000000 +0100
+++ mmass-3.9.0/debian/control 2011-03-11 06:18:45.000000000 +0100
@@ -1,10 +1,11 @@
Source: mmass
Section: science
Priority: optional
-Maintainer: The Debichem Group <[email protected]>
+Maintainer: Ubuntu Developers <[email protected]>
+XSBC-Original-Maintainer: The Debichem Group <[email protected]>
Uploaders: Filippo Rusconi <[email protected]>
DM-Upload-Allowed: yes
-Build-Depends: python (>=2.3.5-11), python-support (>=0.90), debhelper (>= 7), python2.6-dev, python-numpy (>= 1.4.1), imagemagick
+Build-Depends: python (>=2.3.5-11), python-support (>=0.90), debhelper (>= 7), python-dev, python-numpy (>= 1.4.1), imagemagick
Standards-Version: 3.9.1
Homepage: http://www.mmass.org/
Vcs-Git: git://git.debian.org/git/debichem/packages/mmass.git
@@ -14,7 +15,7 @@
Package: mmass
Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, python (>=2.6), python (<=2.7), python-wxgtk2.8 (>= 2.8.10.1-3+b1), python-numpy (>= 1.4.1)
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, python-wxgtk2.8 (>= 2.8.10.1-3+b1), python-numpy (>= 1.4.1)
Suggests: mmass-doc
Description: Mass spectrometry tool for proteomics
mMass is a free mass spectrum viewer/analyzer in which the
diff -Nru mmass-3.9.0/debian/mmass.install mmass-3.9.0/debian/mmass.install
--- mmass-3.9.0/debian/mmass.install 2011-01-14 23:00:36.000000000 +0100
+++ mmass-3.9.0/debian/mmass.install 2011-03-11 06:25:12.000000000 +0100
@@ -11,5 +11,5 @@
gui usr/share/mmass
-mspy/plot/build/lib.linux-*-2.6/calculations.so usr/lib/mmass/mspy/plot
+mspy/plot/build/lib.linux-*-2.*/calculations.so usr/lib/mmass/mspy/plot
diff -Nru mmass-3.9.0/debian/rules mmass-3.9.0/debian/rules
--- mmass-3.9.0/debian/rules 2011-01-14 23:00:36.000000000 +0100
+++ mmass-3.9.0/debian/rules 2011-03-11 06:23:15.000000000 +0100
@@ -38,7 +38,7 @@
# /usr/lib/mmass/mspy/plot/calculations.so. Note that because
# the build path changes according to the platform, the
# mmass.install file has a '*' wildcard in the directory name.
- cd mspy/plot && python2.6 setup.py build
+ cd mspy/plot && python setup.py build
touch build-arch-stamp
--- End Message ---
--- Begin Message ---
Source: mmass
Source-Version: 3.10.0-1
We believe that the bug you reported is fixed in the latest version of
mmass, which is due to be installed in the Debian FTP archive:
mmass-modules_3.10.0-1_amd64.deb
to main/m/mmass/mmass-modules_3.10.0-1_amd64.deb
mmass_3.10.0-1.debian.tar.gz
to main/m/mmass/mmass_3.10.0-1.debian.tar.gz
mmass_3.10.0-1.dsc
to main/m/mmass/mmass_3.10.0-1.dsc
mmass_3.10.0-1_all.deb
to main/m/mmass/mmass_3.10.0-1_all.deb
mmass_3.10.0.orig.tar.gz
to main/m/mmass/mmass_3.10.0.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Filippo Rusconi <[email protected]> (supplier of updated mmass package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 12 Apr 2011 13:47:11 +0200
Source: mmass
Binary: mmass mmass-modules
Architecture: source all amd64
Version: 3.10.0-1
Distribution: unstable
Urgency: low
Maintainer: The Debichem Group <[email protected]>
Changed-By: Filippo Rusconi <[email protected]>
Description:
mmass - Mass spectrometry tool for proteomics
mmass-modules - Mass spectrometry tool for proteomics - extension modules
Closes: 617758
Changes:
mmass (3.10.0-1) unstable; urgency=low
.
* New upstream release.
* Fix restrictive dependency on python2.6 (Closes: #617758). Now
python2.x is allowed. Following suggestion by Fabrice Coutadeur
<[email protected]> (thanks for the patch).
* Put the calculations.so private extension into a new mmass-modules
binary package. Remove the corresponding lintian override.
* Make a clear statement of how the upstream source tarball was
repackaged to yield the orig.tar.gz file. The description is located
at the bottom of the copyright file and in the README.Debian-source
file.
* Remove the mmass-doc binary package to ship the user guide
PDF-formatted file as it comes in upstream's source tarball with no
source and no license (remove dependency on mmass-doc for binary
package mmass);
* Update copyright date and legal text to reflect the wording in the new
version;
* debian/copyright : fix one typo in the GPL version (Thanks Joachim
Reichel <[email protected]>);
* Rename README.Debian-source to README.source (Thanks Joachim
Reichel <[email protected]>);
* debian/rules: add get-orig-source target (Thanks Joachim
Reichel <[email protected]>);
* Add README.Debian to document the absence of the User Guide. Get
installed via mmass.docs (Thanks Joachim Reichel
<[email protected]>);
* Reworded the description of the binary pacakged in the control file
(Thanks Joachim Reichel <[email protected]>);
* Sponsored upload by Joachim Reichel <[email protected]>;
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