Your message dated Thu, 19 May 2011 04:32:10 +0000
with message-id <[email protected]>
and subject line Bug#626044: fixed in samtools 0.1.16-1
has caused the Debian Bug report #626044,
regarding [libbam-dev] Move headers to /usr/include/samtools
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
626044: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=626044
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: libbam-dev
Version: 0.1.15-1
Severity: wishlist
Tags: sid
-- System Information:
Debian Release: wheezy/sid
APT prefers unstable
APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)
-- no debconf information
samtools source pakckage provides libbam-dev package .
Package cufflinks needs sam.h file which is available in the source
of samtools but not availbale via libbam-dev package .
So I think that sam.h file can be included to the libbam-dev package .
Thank you in advance ,
Alex
--- End Message ---
--- Begin Message ---
Source: samtools
Source-Version: 0.1.16-1
We believe that the bug you reported is fixed in the latest version of
samtools, which is due to be installed in the Debian FTP archive:
libbam-dev_0.1.16-1_amd64.deb
to main/s/samtools/libbam-dev_0.1.16-1_amd64.deb
samtools_0.1.16-1.debian.tar.gz
to main/s/samtools/samtools_0.1.16-1.debian.tar.gz
samtools_0.1.16-1.dsc
to main/s/samtools/samtools_0.1.16-1.dsc
samtools_0.1.16-1_amd64.deb
to main/s/samtools/samtools_0.1.16-1_amd64.deb
samtools_0.1.16.orig.tar.bz2
to main/s/samtools/samtools_0.1.16.orig.tar.bz2
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Charles Plessy <[email protected]> (supplier of updated samtools package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 19 May 2011 13:24:25 +0900
Source: samtools
Binary: samtools libbam-dev
Architecture: source amd64
Version: 0.1.16-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Charles Plessy <[email protected]>
Description:
libbam-dev - manipulates nucleotide sequence alignments in BAM or SAM format
samtools - processing sequence alignments in SAM and BAM formats
Closes: 625622 626044
Changes:
samtools (0.1.16-1) unstable; urgency=low
.
* New upstream release, implementing SAM Spec v1.4.
* Distribute sam.h and the other headers in /usr/include/samtools.
Closes: #625622, #626044, LP: #690997.
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samtools_0.1.16-1.debian.tar.gz
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samtools_0.1.16-1_amd64.deb
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libbam-dev_0.1.16-1_amd64.deb
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