Your message dated Sun, 27 Nov 2011 22:48:49 +0000
with message-id <[email protected]>
and subject line Bug#650180: fixed in metis-edf 4.1-2-2
has caused the Debian Bug report #650180,
regarding metis-edf: FTBFS - missing link at math
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
650180: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=650180
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Subject: metis-edf: FTBFS - missing link at math
Package: metis-edf
Severity: normal
metis-edf fails to build on Ubuntu.
Bits from my pbuilder:
...
io.c: In function 'ReadMesh':
io.c:308:9: warning: 'esize' may be used uninitialized in this
function [-Wuninitialized]
gfortran -Wl,-Bsymbolic-functions -Wl,-z,relro -L. -L.. -o ../pmetis
pmetis.o io.o -L.. -lmetis-edf -lm
../libmetis-edf.so: undefined reference to `sqrtf'
../libmetis-edf.so: undefined reference to `log'
../libmetis-edf.so: undefined reference to `pow'
collect2: ld returned 1 exit status
make[2]: *** [../pmetis] Error 1
It seems that Makefile lacks math linking somewhere.
To fix problem, plase add '-lm' at "../libmetis-edf.so" in Libs/Makefile
- $(CC) $(LDFLAGS) -shared -o $@ $(OBJS) -Wl,-soname,libmetis-edf.so.4.1
+ $(CC) $(LDFLAGS) -shared -o $@ $(OBJS) -Wl,-soname,libmetis-edf.so.4.1 -lm
In attachment you can find a update version of Makefile.patch fixing this issue.
Thanks a lot!
Leo Iannacone.
-- System Information:
Debian Release: wheezy/sid
APT prefers oneiric-updates
APT policy: (500, 'oneiric-updates'), (500, 'oneiric'), (100,
'oneiric-backports')
Architecture: i386 (i686)
Kernel: Linux 3.0.0-13-generic (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
--- a/Makefile
+++ b/Makefile
@@ -5,29 +5,21 @@
SUBDIRS=Lib Programs
CONFDIR=./CONFIG
-default: Makefile.in onmetis.exe pmetis kmetis tests
+default: Makefile.in libs programs
-onmetis.exe: Makefile.in
- for d in $(SUBDIRS); do \
- (cd $$d && $(MAKE)); \
- done
-
-pmetis: Makefile.in
- for d in $(SUBDIRS); do \
- (cd $$d && $(MAKE)); \
- done
+libs: Makefile.in
+ (cd Lib && $(MAKE))
-kmetis: Makefile.in
+programs: Makefile.in
for d in $(SUBDIRS); do \
(cd $$d && $(MAKE)); \
done
-
tests:
cd Test ; make
-clean:
+clean: Makefile.in
for d in $(SUBDIRS) Test; do \
(cd $$d && $(MAKE) $@); \
done
@@ -42,5 +34,6 @@
# config : define variables depends on platform
# Linux, IRIX64, SunOS (SOLARIS/SOLARIS64), OSF1 (TRU64)
Makefile.in:
+ echo "Creating Makefile.in"
sh $(CONFDIR)/configure
--- a/Lib/Makefile
+++ b/Lib/Makefile
@@ -2,7 +2,6 @@
INCLUDES = -I.
-CFLAGS = $(COPTIONS) $(INCLUDES)
LD = $(CC) -L.
@@ -17,14 +16,23 @@
mrefine2.o minitpart2.o mbalance2.o mfm2.o \
kvmetis.o kwayvolrefine.o kwayvolfm.o subdomains.o
+all: ../libmetis-edf.a ../libmetis-edf.so
+
+
.c.o:
- $(CC) $(CFLAGS) -c $*.c
+ $(CC) $(COPTIONS) $(INCLUDES) -c $*.c
-../libmetis.a: $(OBJS)
+../libmetis-edf.a: $(OBJS)
$(AR) $@ $(OBJS)
+../libmetis-edf.so: $(OBJS)
+ $(CC) $(LDFLAGS) -shared -o $@ $(OBJS) -Wl,-soname,libmetis-edf.so.4.1 -lm
+ (cd .. && mv libmetis-edf.so libmetis-edf.so.4.1)
+ (cd .. && ln -s libmetis-edf.so.4.1 libmetis-edf.so.4)
+ (cd .. && ln -s libmetis-edf.so.4 libmetis-edf.so)
+
clean:
rm -f *.o
distclean:
- rm -f *.o ; rm -f ../libmetis.a
+ rm -f *.o ; rm -f ../libmetis.a ../libmetis.so*
--- a/Test/Makefile
+++ b/Test/Makefile
@@ -4,12 +4,12 @@
vers_check:
@echo "### Test 2 : test --version option, onmetis returns :"
- (../onmetis --version ; exit 0)
+ (export LD_LIBRARY_PATH=..; ../onmetis.exe --version ; exit 0)
@echo " "
fort.85 : fort.81
@echo "### Test 1 : data file produced by Code_Aster"
- ../onmetis fort.81
+ (export LD_LIBRARY_PATH=..; ../onmetis.exe fort.81; exit 0)
@echo " "
clean:
--- a/Programs/Makefile
+++ b/Programs/Makefile
@@ -3,10 +3,8 @@
BINDIR = ..
INCLUDES = -I../Lib
-CFLAGS = $(COPTIONS) $(INCLUDES)
-FFLAGS = $(FOPTIONS) $(INCLUDES)
-LIBS = -lmetis -lm
-METISLIB = ../libmetis.a
+LIBS = -L.. -lmetis-edf -lm
+METISLIB =
ONMETISOBJS = onmetis.o io_aster.o smbfactor.o ecri11.o lect11.o lect00.o
@@ -16,21 +14,21 @@
.c.o:
- $(CC) $(CFLAGS) -c $*.c
+ $(CC) $(COPTIONS) $(INCLUDES) -c $*.c
default: $(BINDIR)/onmetis.exe $(BINDIR)/pmetis $(BINDIR)/kmetis
-$(BINDIR)/onmetis.exe: $(ONMETISOBJS) $(METISLIB)
+$(BINDIR)/onmetis.exe: $(ONMETISOBJS)
$(LD) $(LDOPTIONS) -o $@ $(ONMETISOBJS) $(LIBS)
chmod 755 $@
-$(BINDIR)/pmetis: $(PMETISOBJS) $(METISLIB)
+$(BINDIR)/pmetis: $(PMETISOBJS)
$(LD) $(LDOPTIONS) -o $@ $(PMETISOBJS) $(LIBS)
chmod 755 $@
-$(BINDIR)/kmetis: $(KMETISOBJS) $(METISLIB)
+$(BINDIR)/kmetis: $(KMETISOBJS)
$(LD) $(LDOPTIONS) -o $@ $(KMETISOBJS) $(LIBS)
chmod 755 $@
@@ -38,11 +36,11 @@
clean:
rm -f *.o
ecri11.o:ecri11.f
- $(F90) $(FFLAGS) -c ecri11.f
+ $(F90) $(FOPTIONS) $(INCLUDES) -c ecri11.f
lect11.o:lect11.f
- $(F90) $(FFLAGS) -c lect11.f
+ $(F90) $(FOPTIONS) $(INCLUDES) -c lect11.f
lect00.o:lect00.f
- $(F90) $(FFLAGS) -c lect00.f
+ $(F90) $(FOPTIONS) $(INCLUDES) -c lect00.f
distclean:
rm -f *.o ;\
rm -f $(BINDIR)/onmetis.exe ;
--- End Message ---
--- Begin Message ---
Source: metis-edf
Source-Version: 4.1-2-2
We believe that the bug you reported is fixed in the latest version of
metis-edf, which is due to be installed in the Debian FTP archive:
libmetis-edf-dev_4.1-2-2_amd64.deb
to non-free/m/metis-edf/libmetis-edf-dev_4.1-2-2_amd64.deb
libmetis-edf4.1_4.1-2-2_amd64.deb
to non-free/m/metis-edf/libmetis-edf4.1_4.1-2-2_amd64.deb
metis-edf_4.1-2-2.debian.tar.gz
to non-free/m/metis-edf/metis-edf_4.1-2-2.debian.tar.gz
metis-edf_4.1-2-2.dsc
to non-free/m/metis-edf/metis-edf_4.1-2-2.dsc
metis-edf_4.1-2-2_amd64.deb
to non-free/m/metis-edf/metis-edf_4.1-2-2_amd64.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Sylvestre Ledru <[email protected]> (supplier of updated metis-edf package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Sun, 27 Nov 2011 22:38:04 +0100
Source: metis-edf
Binary: metis-edf libmetis-edf4.1 libmetis-edf-dev
Architecture: source amd64
Version: 4.1-2-2
Distribution: unstable
Urgency: low
Maintainer: Debian Science Team
<[email protected]>
Changed-By: Sylvestre Ledru <[email protected]>
Description:
libmetis-edf-dev - Family of Multilevel Partitioning Algorithms
libmetis-edf4.1 - Family of Multilevel Partitioning Algorithms
metis-edf - Family of Multilevel Partitioning Algorithms
Closes: 650178 650180
Changes:
metis-edf (4.1-2-2) unstable; urgency=low
.
* Team upload.
* FTBFS - missing link at math fixed (Closes: #650180)
* FTBFS with -Werror=format-security fixed (Closes: #650178)
Thanks to Leo Iannacone for the two FTBFS fixes.
Checksums-Sha1:
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0b7d6aac43fc2f2074de98a84f3809cabbe9d776 6246 metis-edf_4.1-2-2.debian.tar.gz
3726ce36b2bdaeb8a459290aaad11abc9c5869e4 23086 metis-edf_4.1-2-2_amd64.deb
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libmetis-edf4.1_4.1-2-2_amd64.deb
50966eaa20d7c403db033efd6bdbda86792e579a 5690
libmetis-edf-dev_4.1-2-2_amd64.deb
Checksums-Sha256:
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metis-edf_4.1-2-2_amd64.deb
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Files:
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metis-edf_4.1-2-2.debian.tar.gz
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metis-edf_4.1-2-2_amd64.deb
18a6aa132702b933cd7cbfef94231160 133456 non-free/libs extra
libmetis-edf4.1_4.1-2-2_amd64.deb
890fd57c3188b63cbf94dab361b879c6 5690 non-free/libdevel extra
libmetis-edf-dev_4.1-2-2_amd64.deb
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