Your message dated Mon, 26 Dec 2011 10:24:22 -0600
with message-id <[email protected]>
and subject line Re: Bug#653287:
has caused the Debian Bug report #653287,
regarding flann: undefined reference to boost::mpi::communicator::operator
ompi_communicator_t*() const
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
653287: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=653287
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: flann
Version: 1.7.0-3
Severity: important
flann fails to build on armel:
cd
/build/buildd-flann_1.7.0-3-armel-ckKCVm/flann-1.7.0/obj-arm-linux-gnueabi/src/cpp
&& /usr/bin/cmake -E cmake_link_script
CMakeFiles/flann_mpi_server.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Wformat-security -Werror=format-security -O2 -g -Wl,-z,relro
CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o -o
../../bin/flann_mpi_server -rdynamic ../../lib/libflann_cpp.so.1.7.0 -lhdf5
/usr/lib/openmpi/lib/libmpi_cxx.so /usr/lib/openmpi/lib/libmpi.so
/usr/lib/openmpi/lib/libopen-rte.so /usr/lib/openmpi/lib/libopen-pal.so -ldl
-lnsl -lutil -lm -ldl -lboost_mpi-mt -lboost_serialization-mt -lboost_system-mt
-lboost_thread-mt -lpthread -Wl,-whole-archive ../../lib/libflann_cpp_s.a
-Wl,-no-whole-archive -lnsl -lutil -lm -lboost_mpi-mt -lboost_serialization-mt
-lboost_system-mt -lboost_thread-mt -lpthread
-Wl,-rpath,/build/buildd-flann_1.7.0-3-armel-ckKCVm/flann-1.7.0/obj-arm-linux-gnueabi/lib:/usr/lib/openmpi/lib:
CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o: In function
`void boost::mpi::detail::broadcast_impl<flann::Request<float>
>(boost::mpi::communicator const&, flann::Request<float>*, int, int,
mpl_::bool_<false>)':
/usr/include/boost/mpi/collectives/broadcast.hpp:117: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
/usr/include/boost/mpi/collectives/broadcast.hpp:112: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o: In function
`void boost::mpi::detail::tree_reduce_impl<flann::mpi::SearchResults<float>,
flann::mpi::ResultsMerger<float> >(boost::mpi::communicator const&,
flann::mpi::SearchResults<float> const*, int,
flann::mpi::SearchResults<float>*, flann::mpi::ResultsMerger<float>, int,
mpl_::bool_<true>)':
/usr/include/boost/mpi/collectives/reduce.hpp:133: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
/usr/include/boost/mpi/collectives/reduce.hpp:134: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
/usr/include/boost/mpi/collectives/reduce.hpp:134: undefined reference to
`boost::mpi::detail::packed_archive_recv(ompi_communicator_t*, int, int,
boost::mpi::packed_iarchive&, ompi_status_public_t&)'
/usr/include/boost/mpi/collectives/reduce.hpp:145: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
/usr/include/boost/mpi/collectives/reduce.hpp:148: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
/usr/include/boost/mpi/collectives/reduce.hpp:148: undefined reference to
`boost::mpi::detail::packed_archive_send(ompi_communicator_t*, int, int,
boost::mpi::packed_oarchive const&)'
CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o: In function
`all_gather_impl<int>':
/usr/include/boost/mpi/collectives/all_gather.hpp:31: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
collect2: ld returned 1 exit status
make[3]: *** [bin/flann_mpi_server] Error 1
make[3]: Leaving directory
`/build/buildd-flann_1.7.0-3-armel-ckKCVm/flann-1.7.0/obj-arm-linux-gnueabi'
make[2]: *** [src/cpp/CMakeFiles/flann_mpi_server.dir/all] Error 2
make[1]: *** [all] Error 2
dh_auto_build: make -j1 returned exit code 2
-- System Information:
Debian Release: 6.0.1
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable'), (200, 'testing'), (100,
'unstable')
Architecture: amd64 (x86_64)
Kernel: Linux 2.6.32-5-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
--- End Message ---
--- Begin Message ---
On Mon, Dec 26, 2011 at 02:20:57PM +0100, Mathieu Malaterre wrote:
> reassign libboost-all-dev 1.46.1-7
> thanks
>
> flann fails to build when linking to mpi libraries on armel, mips,
> mipsel, s390 and sparc:
> I would be tempted to simply re-upload with hardcoded 1.48 boost version.
The new upload is done so the bug is fixed. I'm not sure it's really
a bug in libboost-all-dev -- the code builds on other architectures
with boost 1.46.1. Maybe something has changed (MPI defaults?) on
these architectures since the time boost 1.46.1 was build versus 1.48?
-S
signature.asc
Description: Digital signature
--- End Message ---
