Your message dated Fri, 30 Mar 2012 16:29:00 +0000
with message-id <[email protected]>
and subject line Bug#648845: fixed in statsmodels 0.3.1-4
has caused the Debian Bug report #648845,
regarding statsmodels: allow TestProbitCG to iterate longer, fixing Ubuntu FTBFS
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
648845: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=648845
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: statsmodels
Version: 0.3.1-2
Severity: normal
Tags: patch
User: [email protected]
Usertags: origin-ubuntu precise ubuntu-patch
Dear Maintainer,
I'm not sure why this fails on Ubuntu but not Debian, but we are getting a
FTBFS due to a failure in test_discrete.py's TestProbitCG.
https://launchpadlibrarian.net/83193398/buildlog_ubuntu-precise-i386.statsmodels_0.3.1-2_FAILEDTOBUILD.txt.gz
By simply bumping the number of iterations allowed for that test to converge,
we can fix it. The attached patch does that.
I've forwarded the idea upstream:
https://github.com/statsmodels/statsmodels/issues/109
Thanks for considering the patch.
-- System Information:
Debian Release: wheezy/sid
APT prefers precise-updates
APT policy: (500, 'precise-updates'), (500, 'precise-security'), (500,
'precise')
Architecture: i386 (i686)
Kernel: Linux 3.1.0-2-generic-pae (SMP w/4 CPU cores)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
diff -Nru statsmodels-0.3.1/debian/patches/fix_test_discrete.patch statsmodels-0.3.1/debian/patches/fix_test_discrete.patch
--- statsmodels-0.3.1/debian/patches/fix_test_discrete.patch 1969-12-31 19:00:00.000000000 -0500
+++ statsmodels-0.3.1/debian/patches/fix_test_discrete.patch 2011-11-15 10:02:45.000000000 -0500
@@ -0,0 +1,16 @@
+Description: Let TestProbitCG test run for a bit longer, fixing FTBFS
+Author: Michael Terry <[email protected]>
+
+Index: statsmodels-0.3.1/scikits/statsmodels/discrete/tests/test_discrete.py
+===================================================================
+--- statsmodels-0.3.1.orig/scikits/statsmodels/discrete/tests/test_discrete.py 2011-11-15 09:57:09.346314408 -0500
++++ statsmodels-0.3.1/scikits/statsmodels/discrete/tests/test_discrete.py 2011-11-15 10:01:45.998317336 -0500
+@@ -227,7 +227,7 @@
+ res2.probit()
+ cls.res2 = res2
+ cls.res1 = Probit(data.endog, data.exog).fit(method="cg",
+- disp=0, maxiter=250)
++ disp=0, maxiter=500)
+
+ class TestProbitNCG(CheckModelResults):
+ @classmethod
diff -Nru statsmodels-0.3.1/debian/patches/series statsmodels-0.3.1/debian/patches/series
--- statsmodels-0.3.1/debian/patches/series 2011-08-25 17:38:04.000000000 -0400
+++ statsmodels-0.3.1/debian/patches/series 2011-11-15 10:01:33.000000000 -0500
@@ -1 +1,2 @@
+fix_test_discrete.patch
debian-changes-0.3.1-2
--- End Message ---
--- Begin Message ---
Source: statsmodels
Source-Version: 0.3.1-4
We believe that the bug you reported is fixed in the latest version of
statsmodels, which is due to be installed in the Debian FTP archive:
python-scikits.statsmodels-doc_0.3.1-4_all.deb
to main/s/statsmodels/python-scikits.statsmodels-doc_0.3.1-4_all.deb
python-scikits.statsmodels_0.3.1-4_all.deb
to main/s/statsmodels/python-scikits.statsmodels_0.3.1-4_all.deb
statsmodels_0.3.1-4.debian.tar.gz
to main/s/statsmodels/statsmodels_0.3.1-4.debian.tar.gz
statsmodels_0.3.1-4.dsc
to main/s/statsmodels/statsmodels_0.3.1-4.dsc
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Yaroslav Halchenko <[email protected]> (supplier of updated statsmodels
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Thu, 29 Mar 2012 12:44:27 -0400
Source: statsmodels
Binary: python-scikits.statsmodels python-scikits.statsmodels-doc
Architecture: source all
Version: 0.3.1-4
Distribution: unstable
Urgency: low
Maintainer: NeuroDebian Team <[email protected]>
Changed-By: Yaroslav Halchenko <[email protected]>
Description:
python-scikits.statsmodels - classes and functions for the estimation of
statistical models
python-scikits.statsmodels-doc - documentation and examples for
python-scikits.statsmodels
Closes: 648845 663986
Changes:
statsmodels (0.3.1-4) unstable; urgency=low
.
* Added patch from Ubuntu: fix_test_discrete.patch. Thanks Michael Terry for
the patch and Gregor Herrmann for the reminder (Closes: #663986, #648845)
* upon clean -- remove autogenerated version.py
* debian/copyright: adjusted for DEP-5
* debian/control: boosted policy to 3.9.3 (no changes)
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