Your message dated Wed, 01 Aug 2012 14:47:14 +0000
with message-id <[email protected]>
and subject line Bug#683513: fixed in biojava3-live 3.0.4-2
has caused the Debian Bug report #683513,
regarding biojava3-live: Transition package to using default java 
implementation.
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)


-- 
683513: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=683513
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: biojava3-live
Version: 3.0.4-1
Severity: normal
Tags: patch
User: [email protected]
Usertags: origin-ubuntu quantal ubuntu-patch

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Hash: SHA256

Dear Maintainer,

In Ubuntu, the attached patch was applied to achieve the following:

  * Transition to use default java implementation:
    - d/control: Use default-jdk (>= 1:1.6) instead of openjdk-6-jdk
      for package build.

This will support no change transition when the default java implementation
changes (as is has in Ubuntu quantal).

Thanks for considering the patch.


- -- System Information:
Debian Release: wheezy/sid
  APT prefers quantal-updates
  APT policy: (500, 'quantal-updates'), (500, 'quantal-security'), (500, 
'quantal')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 3.5.0-7-generic (SMP w/8 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

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diff -Nru biojava3-live-3.0.4/debian/changelog biojava3-live-3.0.4/debian/changelog
diff -Nru biojava3-live-3.0.4/debian/control biojava3-live-3.0.4/debian/control
--- biojava3-live-3.0.4/debian/control	2012-05-30 10:36:52.000000000 +0100
+++ biojava3-live-3.0.4/debian/control	2012-08-01 12:10:29.000000000 +0100
@@ -7,7 +7,7 @@
 Build-Depends-Indep: libcommons-dbcp-java (>= 1.1), libhsqldb-java,
  libcommons-collections-java (>= 2.1), libcommons-pool-java (>= 1.1),
  libcommons-cli-java, libguava-java (>= 11.0.1),
- openjdk-6-jdk | sun-java6-jdk, junit4,javahelper (>=0.25), libjgrapht-java,
+ default-jdk (>= 1:1.6), junit4,javahelper (>=0.25), libjgrapht-java,
  ant-optional, jmol-applet, icedtea-netx, libhamcrest-java, libjson-simple-java
 Build-Depends: debhelper (>= 9), ant
 Standards-Version: 3.9.3

--- End Message ---
--- Begin Message ---
Source: biojava3-live
Source-Version: 3.0.4-2

We believe that the bug you reported is fixed in the latest version of
biojava3-live, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Olivier Sallou <[email protected]> (supplier of updated biojava3-live package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


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Format: 1.8
Date: Wed, 01 Aug 2012 15:45:32 +0200
Source: biojava3-live
Binary: libbiojava3.0-java libbiojava3-java libbiojava3-java-doc
Architecture: source all
Version: 3.0.4-2
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Olivier Sallou <[email protected]>
Description: 
 libbiojava3-java - Java API to biological data and applications (default 
version)
 libbiojava3-java-doc - [Biology] Documentation for BioJava
 libbiojava3.0-java - Java API to biological data and applications (version 3)
Closes: 683513
Changes: 
 biojava3-live (3.0.4-2) unstable; urgency=low
 .
   [ Olivier Sallou ]
   Patch from James Page <[email protected]> (Closes: #683513).
   * Transition to use default java implementation:
     - d/control: Use default-jdk (>= 1:1.6) instead of openjdk-6-jdk
       for package build.
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biojava3-live_3.0.4-2.debian.tar.gz
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Files: 
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libbiojava3-java_3.0.4-2_all.deb
 4a68d9155799ff69cf8507e363c2553a 2161194 doc optional 
libbiojava3-java-doc_3.0.4-2_all.deb

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