Your message dated Mon, 01 Oct 2012 03:17:55 +0000 with message-id <[email protected]> and subject line Bug#689027: fixed in mdp 3.3-1 has caused the Debian Bug report #689027, regarding mdp: FTBFS: MDP fails to import if pp server can not start to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 689027: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=689027 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: python-mdp Version: 3.2+git78-g7db3c50-3 Severity: grave Tags: upstream As reported by Yaroslav Halchenko, mdp fails to import if python-pp is installed but pp server fails to start. This can happen if the machine is low on memory for example. The bug is grave because mdp FTBFS ona buildbot with low memory: the tests run at build-time will fail. Original bug report: was trying to build pymvpa documentation and that failed miserably due to File "/usr/lib/pymodules/python2.7/sphinx/ext/autodoc.py", line 321, in import_object __import__(self.modname) File "/home/yoh/proj/pymvpa/pymvpa/mvpa2/mappers/lle.py", line 21, in <module> from mvpa2.mappers.mdp_adaptor import MDPNodeMapper File "/home/yoh/proj/pymvpa/pymvpa/mvpa2/mappers/mdp_adaptor.py", line 18, in <module> import mdp File "/usr/lib/python2.7/dist-packages/mdp/__init__.py", line 124, in <module> configuration.set_configuration() File "/usr/lib/python2.7/dist-packages/mdp/configuration.py", line 330, in set_configuration if _pp_needs_monkeypatching(): File "/usr/lib/python2.7/dist-packages/mdp/configuration.py", line 292, in _pp_needs_monkeypatching server = pp.Server() File "/usr/lib/pymodules/python2.7/pp.py", line 340, in __init__ self.set_ncpus(ncpus) File "/usr/lib/pymodules/python2.7/pp.py", line 504, in set_ncpus range(ncpus - len(self.__workers))]) File "/usr/lib/pymodules/python2.7/pp.py", line 140, in __init__ self.start() File "/usr/lib/pymodules/python2.7/pp.py", line 146, in start stdout=subprocess.PIPE, stderr=subprocess.PIPE) File "/usr/lib/python2.7/subprocess.py", line 679, in __init__ errread, errwrite) File "/usr/lib/python2.7/subprocess.py", line 1143, in _execute_child self.pid = os.fork() OSError: [Errno 12] Cannot allocate memory -- System Information: Debian Release: wheezy/sid APT prefers unstable APT policy: (500, 'unstable'), (101, 'experimental') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 3.2.0-3-amd64 (SMP w/4 CPU cores) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Versions of packages python-mdp depends on: ii python 2.7.3-2 ii python-numpy 1:1.6.2-1 ii python2.6 2.6.8-0.2 ii python2.7 2.7.3-5 Versions of packages python-mdp recommends: ii python-joblib 0.6.5-1~nd+1 ii python-libsvm 3.12-1 ii python-pp 1.6.2-1 ii python-scipy 0.10.1+dfsg1-4 ii python-sklearn 0.12.0-1~nd+1 Versions of packages python-mdp suggests: ii python-py 1.4.9-1 ii shogun-python-modular 1.1.0-6 -- no debconf information
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--- Begin Message ---Source: mdp Source-Version: 3.3-1 We believe that the bug you reported is fixed in the latest version of mdp, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Tiziano Zito <[email protected]> (supplier of updated mdp package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Wed, 26 Sep 2012 10:28:55 +0200 Source: mdp Binary: python-mdp python3-mdp Architecture: source all Version: 3.3-1 Distribution: unstable Urgency: low Maintainer: Tiziano Zito <[email protected]> Changed-By: Tiziano Zito <[email protected]> Description: python-mdp - Modular toolkit for Data Processing python3-mdp - Modular toolkit for Data Processing Closes: 687408 689027 689028 Changes: mdp (3.3-1) unstable; urgency=low . * New upstream bug-fix release (list only changes not already in Debian) - Make random failing SFA2Node tests more robust - Make random failing FastICANode tests more robust - Fix sklearn wrappers for version 0.11 (sid) and 0.12 (experimental) (Closes: #689028) - Disable pp support if pp server can not be started (Closes: #689027) * Fix seed in built-time testing of Debian package (Closes: #687408) * Upload sponsored by Yaroslav Halchenko Checksums-Sha1: 3224014e5bd34eba0c3eafa5d9c19e8ec081c7d0 1401 mdp_3.3-1.dsc e881ac88b8450bdb7c8788020bafbbbd9ff3a876 472646 mdp_3.3.orig.tar.gz a984eb506736dffa03ba5a0f9175e92fc84517d4 5411 mdp_3.3-1.debian.tar.gz 3793dc1c5f69b296db09f38957dc7d3266f2c07f 483516 python-mdp_3.3-1_all.deb accdd2b28a992ff3aefd4642d8243d0999993c88 471826 python3-mdp_3.3-1_all.deb Checksums-Sha256: c9a367af7d03c91ce99f239713396175e7deb72fe65f1e8c4f5f1654d8c04642 1401 mdp_3.3-1.dsc 210221c96fe1d3b85461c786e3bb0f3a230aa569acb016b8d0c7997068580e0a 472646 mdp_3.3.orig.tar.gz 5eabbf349657b9081bd9e449a40ee59cf11f14ed75b0d435f948d6c583ac1f14 5411 mdp_3.3-1.debian.tar.gz 7600b1fded26bb3e6d25641b4e88eb15d718aca0f0d6367253cd09e1a826ddd2 483516 python-mdp_3.3-1_all.deb 39b57b1f844c7cf100320358b1cb82f86cc1894e77f9829543f2e8825f23da7c 471826 python3-mdp_3.3-1_all.deb Files: 0b788bacb1965ce0511b9d66f32cfb91 1401 python optional mdp_3.3-1.dsc 2f2488adb4b56cccd08eca7869afc420 472646 python optional mdp_3.3.orig.tar.gz 4004aabc866df14bbda6c57f9b2110c0 5411 python optional mdp_3.3-1.debian.tar.gz a52024ac77f95b1a1b6b2f06100ab9b3 483516 python optional python-mdp_3.3-1_all.deb 5f6fc6c918519fbcd8d1deffcb8abc4d 471826 python optional python3-mdp_3.3-1_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.12 (GNU/Linux) iEYEARECAAYFAlBpAkwACgkQjRFFY3XAJMgOdgCdGzfm6TGaNSNEXYKRCN6K8gTY mwgAoNDKH213KOw27Ypr2ebn6cFBy3od =+j0M -----END PGP SIGNATURE-----
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