Your message dated Thu, 08 Aug 2013 07:18:38 +0000
with message-id <[email protected]>
and subject line Bug#718850: fixed in trimmomatic 0.30+dfsg-1
has caused the Debian Bug report #718850,
regarding trimmomatic: Please use default-jdk as a build dependency
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
718850: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=718850
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: trimmomatic
Severity: important
Hello,
Your package uses 'openjdk-6-jdk | java6-sdk | java7-jdk' as a build dependency.
Please switch to default-jdk to help us completing the OpenJDK 7 transition.
By the way, the trimmomatic package should depend on default-jre.
Thanks
Sylvestre
-- System Information:
Debian Release: jessie/sid
APT prefers testing
APT policy: (600, 'testing'), (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 3.9-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
--- End Message ---
--- Begin Message ---
Source: trimmomatic
Source-Version: 0.30+dfsg-1
We believe that the bug you reported is fixed in the latest version of
trimmomatic, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated trimmomatic package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 07 Aug 2013 12:14:33 +0200
Source: trimmomatic
Binary: trimmomatic
Architecture: source all
Version: 0.30+dfsg-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
trimmomatic - flexible read trimming tool for Illumina NGS data
Closes: 718850
Changes:
trimmomatic (0.30+dfsg-1) unstable; urgency=low
.
* New upstream version
* debian/copyright:
- DEP5
- Add Files-Excluded to document what was removed from original source
* debian/watch: handle +dfsg suffix
* debian/get-orig-source: use new uscan if available
* debian/control:
- cme fix dpkg-control
- debhelper 9
- use anonscm in Vcs fields
- Build-Depends: default-jdk | ...
Closes: #718850
[ Olivier Sallou]
* Manage java libs with javahelper
* Provide upstream missing MANIFEST.MF
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