Your message dated Tue, 13 May 2014 15:20:21 +0000 with message-id <[email protected]> and subject line Bug#747431: fixed in genometools 1.5.1-3 has caused the Debian Bug report #747431, regarding Don't use -m64 for mips64(el) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 747431: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=747431 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: genometools Version: 1.5.1-2 For mips64 and mips64el, they use -mabi=64 instead of -m64 This patch can fix this problems Index: genometools-1.5.1/Makefile =================================================================== --- genometools-1.5.1.orig/Makefile 2014-05-08 13:07:05.000000000 +0000 +++ genometools-1.5.1/Makefile 2014-05-08 13:22:12.376923148 +0000 @@ -372,13 +372,11 @@ endif ifeq ($(m64),yes) - ifneq ($(MACHINE),ia64) - ifneq ($(MACHINE),alpha) + ifeq (,$(filter $(MACHINE),ia64 alpha mips64 mips64el)) GT_CFLAGS += -m64 HMMER_CFLAGS += -m64 GT_LDFLAGS += -m64 SQLITE_CFLAGS += -m64 - endif endif endif -- Yunqiang Su
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--- Begin Message ---Source: genometools Source-Version: 1.5.1-3 We believe that the bug you reported is fixed in the latest version of genometools, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Sascha Steinbiss <[email protected]> (supplier of updated genometools package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sat, 10 May 2014 22:28:41 +0000 Source: genometools Binary: genometools genometools-common libgenometools0 libgenometools0-dev genometools-doc genometools-dbg python-genometools Architecture: source amd64 all Version: 1.5.1-3 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Sascha Steinbiss <[email protected]> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg - versatile genome analysis toolkit, with debug symbols genometools-doc - documentation for GenomeTools libgenometools0 - versatile genome analysis library libgenometools0-dev - development files for GenomeTools python-genometools - Python bindings for genometools Closes: 747431 Changes: genometools (1.5.1-3) unstable; urgency=low . * debian/rules - Add basic tests to check whether cairo/pango linking works - Clean up indices created by tests to make repeated builds possible - Make sure bin/examples/sketch_parsed_with_* are built - Enable compiler optimization * debian/control - Move libgenometools0 package into libs section - Switch pango deps to new package - Add ruby builddep, required for the testsuite * Fix compilation on mips64/mips64el Closes: #747431 Checksums-Sha1: 171cc4d86d51d1e0cf11a5da2a569240d997d9ef 2718 genometools_1.5.1-3.dsc 3b80a2e643c5e2f57e45efade40fd29c1973edb0 55192 genometools_1.5.1-3.debian.tar.xz 8c597759ef0948acc69d67f881c9da3ff949899c 1607116 genometools_1.5.1-3_amd64.deb d0602be48258a635c2d181322e3c32d1c0e03036 136416 genometools-common_1.5.1-3_all.deb a40142fde9c539edfc718c8b3596ce9c6976dac2 1599292 libgenometools0_1.5.1-3_amd64.deb 5fb768afed719bbbfe7f8136d7e27c465980da20 69570 libgenometools0-dev_1.5.1-3_amd64.deb a8adfa7907ce2537eac7d1eb97c9f836428d7bf0 2625790 genometools-doc_1.5.1-3_all.deb 29165f33114933ca4bddaf78fc90f1e7a0edde40 7379064 genometools-dbg_1.5.1-3_amd64.deb 7257310a640d8d4fed0050cdca5e92e29cc83ba4 27866 python-genometools_1.5.1-3_amd64.deb Checksums-Sha256: d094cb51f850d1e41dfbcca628ce1b858c23c0e4c854f7bdb8466d58673f2ecb 2718 genometools_1.5.1-3.dsc 528c2768af40ad1bd7e700eb2a55ff928f4f758d4425e38045310c6a99d62e99 55192 genometools_1.5.1-3.debian.tar.xz 00bb86b56f254c74f4ccd333eb13dc0645175c027cc678a366adb0d10d8fa1bd 1607116 genometools_1.5.1-3_amd64.deb 4daa43a74f5ee3ccc64c24099be2f89d60baef359af2236e88f775842ac0377e 136416 genometools-common_1.5.1-3_all.deb 2eafe28a9f521b11ab6e66e346ae708ed67f1e53e32d358adac06b1ed5c7ced2 1599292 libgenometools0_1.5.1-3_amd64.deb 53248696d286176b9cf2b004776a50082e7d8eeefd7bb36e3e2825c58f8207fc 69570 libgenometools0-dev_1.5.1-3_amd64.deb a3237e93c7a1957c10b44b92e976daef9cac54936a23117053f3a9022f9e070d 2625790 genometools-doc_1.5.1-3_all.deb 624e65cfe84defd493fa3f6188aad370736b8b9d86bb2e5c2ffbc8fd5a243c4d 7379064 genometools-dbg_1.5.1-3_amd64.deb 12b8d4bc4f9c1d85ff470991b29570aa8c957adb81dacc91302d99d1943866c6 27866 python-genometools_1.5.1-3_amd64.deb Files: 6e3779cc289e44309ef2a7d7aa2902d7 1607116 science optional genometools_1.5.1-3_amd64.deb 3eceb316e065dbd0a1ba5b63d0bb966b 136416 science optional genometools-common_1.5.1-3_all.deb 2cb43aadfde5abe21f0af61fb45a8f6e 1599292 libs optional libgenometools0_1.5.1-3_amd64.deb 7230dc2eed34f92a00597898ccc0c6c9 69570 libdevel optional libgenometools0-dev_1.5.1-3_amd64.deb ebd508321b0ec84f3eeb747ea3291d40 2625790 doc optional genometools-doc_1.5.1-3_all.deb 1285697b069ade280529c53d8fde29ca 7379064 debug extra genometools-dbg_1.5.1-3_amd64.deb 5a47a6dc0e8bda81b7c98a8356c28f00 27866 python optional python-genometools_1.5.1-3_amd64.deb 8c9808a6866936de80b0eeaa1334bc5e 2718 science optional genometools_1.5.1-3.dsc 962368db98e5e0dedfb75f1fe989ad2f 55192 science optional genometools_1.5.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJTcgcnAAoJEFVWo04Eo2ELvQ0P/RIM4l539BvaA2EcVvIvHgKB d140u5SU40BpE8v6MOgdkQ2yk7lAswgxRycJoYi3na3Y4l3yzWeEtgoVIkv73oEg sbfo1MU9xyuh9QcA1aGKMqOT2dJjvO8rsHMJJg77MSw4CkTMMYd+fFTqjAABznOZ e5HqLCCo7Ks8KOMkINf5Aukl4GCfWX2FROiftbeaABAWXC48EOOM1zcVl5q6itNk QDEdd5QqZ6zNfitJ4zFmgAMRTNI3H6wYWNIAoGdEe8X87FlCuDI/ezcB2DC+UZrZ kPdrnbM5ZDQvSGEWitEaz1GI3GyjgoGQK2FW0jw60vFFbIsdsBKSXjpi5Dd8tWpv ncbHSkzUrXatKa91TpJcnDmBHHEULBdpGrnWWNbhonvN03QT+g1yj0IrqBGlffPl zFdHozlFTZmsP6cz6EBR5gp1TkP2xY2J9zvIaQGAGYVNJyIXarvkH7vIRlwEY6KZ S8sVVgcbkrPqeDyxPy+oBA8caJ7vGeaccu5MG7HoExCE9WTQZCH7Vxy+t5VDVwPY DO2mR9EdGUSJXIF2YCnRismPqGsEKGKxXiKw1hQsMVXNqwsXom/jme2cFilpn0z+ uZ0wVmrw3zL37EjMhZS4AKCNyqjsoWNIfca/BD8jl3yOjh3ZeW5d7aTzLSstqgjE gkGvm4gCaweemFzA75on =AqTv -----END PGP SIGNATURE-----
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