Your message dated Fri, 06 Jun 2014 06:04:33 +0000
with message-id <[email protected]>
and subject line Bug#749909: fixed in freefoam 0.1.0+dfsg-1.1
has caused the Debian Bug report #749909,
regarding package freefoam_0.1.0+dfsg-1 FTBFS mips(el)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
749909: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=749909
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: freefoam
Version: 0.1.0+dfsg-1
Severity: important
Tags: sid patch
Justification: FTBFS
User: [email protected]
Usertags: mips-patch
After the bug number 735248
(https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=735248) has been resolved,
following errors were found while building package freefoam on mips(el):
--------------------------------
cd
/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu/doc/Doxygen
&& /usr/bin/python
/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu/doc/Doxygen/fixupDoxygen.py
Fixing up Doxygen generated API documentation
- Parsing *_source.html
- Computing mangled file names
- Fixing #include linkes in the *_source.html files
- Fixing remaining #include links and expanding placeholders
make[3]: Leaving directory
'/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu'
/usr/bin/cmake -E cmake_progress_report
/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu/CMakeFiles
[ 47%] Built target apidoc-all
make[2]: Leaving directory
'/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu'
Makefile:119: recipe for target 'all' failed
make[1]: *** [all] Error 2
--------------------------------
[ 92%] Building CXX object
applications/utilities/mesh/manipulation/setSet/CMakeFiles/setSet.dir/writeFuns.C.o
cd
/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu/applications/utilities/mesh/manipulation/setSet
&& /usr/bin/g++ -DDP -DNoRepository -DREADLINE=1 -DSiCortex64 -g -O2
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fpermissive
-D_FORTIFY_SOURCE=2
-I/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu/include
-o CMakeFiles/setSet.dir/writeFuns.C.o -c
/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/applications/utilities/mesh/manipulation/setSet/writeFuns.C
/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/applications/utilities/mesh/manipulation/setSet/writeFuns.C:29:23:
fatal error: standards.h: No such file or directory
#include <standards.h>
^
compilation terminated.
applications/utilities/mesh/manipulation/setSet/CMakeFiles/setSet.dir/build.make:106:
recipe for target
'applications/utilities/mesh/manipulation/setSet/CMakeFiles/setSet.dir/writeFuns.C.o'
failed
make[3]: ***
[applications/utilities/mesh/manipulation/setSet/CMakeFiles/setSet.dir/writeFuns.C.o]
Error 1
make[3]: Leaving directory
'/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu'
CMakeFiles/Makefile2:12815: recipe for target
'applications/utilities/mesh/manipulation/setSet/CMakeFiles/setSet.dir/all'
failed
make[2]: ***
[applications/utilities/mesh/manipulation/setSet/CMakeFiles/setSet.dir/all]
Error 2
make[2]: Leaving directory
'/build/freefoam-5sB8KW/najnoviji-original/freefoam-0.1.0+dfsg/obj-mips-linux-gnu'
Makefile:119: recipe for target 'all' failed
make[1]: *** [all] Error 2
--------------------------------
I have attached a patch resolving these issues.
Patch freefoam-doc-and-mips.diff is attached.
Most of this patch is taken from upstream.
With it, freefoam package builds without an error on mips and mipsel.
libxml2-utils is added as dependency (for package asciidoc) to a
Build-Depends-Indep group in order to override issue 692274
(https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=692274)
Regards,
Jurica
diff -upNr freefoam-0.1.0+dfsg-orig/debian/control freefoam-0.1.0+dfsg/debian/control
--- freefoam-0.1.0+dfsg-orig/debian/control 2012-07-30 05:28:49.000000000 +0000
+++ freefoam-0.1.0+dfsg/debian/control 2014-05-23 13:01:12.000000000 +0000
@@ -9,11 +9,12 @@ Vcs-Git: git://git.debian.org/git/debian
Vcs-Browser: http://git.debian.org/?p=debian-science/packages/freefoam.git
DM-Upload-Allowed: yes
Homepage: http://freefoam.wiki.sourceforge.net/
-Build-Depends: cdbs, debhelper (>= 5.0.24), python-support, cmake, flex,
- gawk, python, libreadline6-dev, zlib1g-dev, libscotch-dev,
- mpi-default-dev, mpi-default-bin, paraview (>= 3.8), doxygen,
- libjs-jquery, asciidoc, xmlto, docbook-utils, dvipng, asymptote,
- texlive-science, dblatex, dpkg-dev (>= 1.16.1~), graphviz
+Build-Depends: cdbs, debhelper (>= 5.0.24), python-support, cmake, flex, gawk,
+ python, libreadline6-dev, zlib1g-dev, libscotch-dev, mpi-default-dev,
+ mpi-default-bin, paraview (>= 3.8), dpkg-dev (>= 1.16.1~)
+Build-Depends-Indep: doxygen,
+ libjs-jquery, asciidoc, docbook-utils, dvipng, asymptote, texlive-science,
+ dblatex, graphviz, libxml2-utils
Standards-Version: 3.9.3
Package: libfreefoam1
diff -upNr freefoam-0.1.0+dfsg-orig/debian/freefoam-dev-doc.install freefoam-0.1.0+dfsg/debian/freefoam-dev-doc.install
--- freefoam-0.1.0+dfsg-orig/debian/freefoam-dev-doc.install 2012-07-31 13:24:02.000000000 +0000
+++ freefoam-0.1.0+dfsg/debian/freefoam-dev-doc.install 2014-05-23 13:01:12.000000000 +0000
@@ -1,3 +1,3 @@
debian/tmp/usr/share/doc/freefoam/API/* /usr/share/doc/freefoam-dev-doc/api
debian/tmp/usr/share/doc/freefoam/css debian/tmp/usr/share/doc/freefoam/img /usr/share/doc/freefoam-dev-doc
-debian/tmp/usr/share/freefoam/DoxyDocIndex /usr/share/freefoam
+*/InstallFiles/data/DoxyDocIndex /usr/share/freefoam
diff -upNr freefoam-0.1.0+dfsg-orig/debian/patches/mips-patch.diff freefoam-0.1.0+dfsg/debian/patches/mips-patch.diff
--- freefoam-0.1.0+dfsg-orig/debian/patches/mips-patch.diff 1970-01-01 00:00:00.000000000 +0000
+++ freefoam-0.1.0+dfsg/debian/patches/mips-patch.diff 2014-05-23 12:59:57.000000000 +0000
@@ -0,0 +1,24 @@
+--- freefoam-0.1.0+dfsg.orig/applications/utilities/mesh/manipulation/setSet/writeFuns.C
++++ freefoam-0.1.0+dfsg/applications/utilities/mesh/manipulation/setSet/writeFuns.C
+@@ -26,8 +26,7 @@ License
+ #include "writeFuns.H"
+
+ #if defined(__mips) && !defined(__SICORTEX__)
+-#include <standards.h>
+-#include <sys/endian.h>
++#include <endian.h>
+ #endif
+
+ #if defined(LITTLE_ENDIAN) \
+--- freefoam-0.1.0+dfsg.orig/applications/utilities/postProcessing/dataConversion/foamToVTK/writeFuns.C
++++ freefoam-0.1.0+dfsg/applications/utilities/postProcessing/dataConversion/foamToVTK/writeFuns.C
+@@ -27,8 +27,7 @@ License
+ #include "vtkTopo.H"
+
+ #if defined(__mips) && !defined(__SICORTEX__)
+-#include <standards.h>
+-#include <sys/endian.h>
++#include <endian.h>
+ #endif
+
+ // MacOSX
diff -upNr freefoam-0.1.0+dfsg-orig/debian/patches/series freefoam-0.1.0+dfsg/debian/patches/series
--- freefoam-0.1.0+dfsg-orig/debian/patches/series 2012-07-31 13:18:15.000000000 +0000
+++ freefoam-0.1.0+dfsg/debian/patches/series 2014-05-23 12:59:57.000000000 +0000
@@ -9,3 +9,4 @@ correct-output-directory-for-freefoam-lo
escape-meta-chars-for-doxygen-filter.diff
fix-installation-dirs-for-template-files.diff
update-doxygen-foamheader.diff
+mips-patch.diff
diff -upNr freefoam-0.1.0+dfsg-orig/debian/rules freefoam-0.1.0+dfsg/debian/rules
--- freefoam-0.1.0+dfsg-orig/debian/rules 2012-07-30 05:28:49.000000000 +0000
+++ freefoam-0.1.0+dfsg/debian/rules 2014-05-23 13:01:12.000000000 +0000
@@ -36,11 +36,11 @@ FF_CONFIG_PACK= \
-DCPACK_SOURCE_ZIP=OFF \
FF_DOC= \
- -DFOAM_ENABLE_PDF_GUIDES=ON \
+ -DFOAM_ENABLE_PDF_GUIDES=OFF \
-DFOAM_ENABLE_XHTML_GUIDES=OFF \
-DFOAM_ENABLE_XHTML_HELP=OFF \
-DFOAM_ENABLE_MATHJAX=OFF \
- -DFOAM_ENABLE_DOXYGEN_DOCS=ON \
+ -DFOAM_ENABLE_DOXYGEN_DOCS=OFF \
-DFOAM_ENABLE_MANPAGE_HELP=OFF \
-DFOAM_DOCS_FOR_SF=OFF \
@@ -74,10 +74,24 @@ DEB_CMAKE_EXTRA_FLAGS= \
$(FF_DOC) \
$(FF_INSTALL)
+DEB_DH_MAKESHLIBDEPS_ARGS_libfreefoam1=-X/usr/lib/$(FF_SUBDIR)
+TOP_BUILDDIR := $(DEB_BUILDDIR)
-DEB_DH_MAKESHLIBDEPS_ARGS_libfreefoam1=-X/usr/lib/$(FF_SUBDIR)
+# Re-configure for doc packages
+configure/freefoam-user-doc configure/freefoam-dev-doc:: debian/freefoam-enable-docs.stamp
+
+debian/freefoam-enable-docs.stamp:
+ cd $(TOP_BUILDDIR); \
+ cmake \
+ -DFOAM_ENABLE_PDF_GUIDES=ON \
+ -DFOAM_ENABLE_DOXYGEN_DOCS=ON \
+ $(CURDIR)
+ touch $@
+build/freefoam-user-doc:: DEB_MAKE_BUILD_TARGET := UserGuide-pdf
+
+build/freefoam-dev-doc:: DEB_MAKE_BUILD_TARGET := apidoc-all
install/libfreefoam1::
install -d $(CURDIR)/debian/libfreefoam1/usr/lib/$(FF_SUBDIR)
@@ -94,14 +108,22 @@ install/freefoam::
install -d $(CURDIR)/debian/freefoam/etc/bash_completion.d
cp $(CURDIR)/data/shellFunctions/bashCompletion/freefoam $(CURDIR)/debian/freefoam/etc/bash_completion.d/
-install/freefoam-user-doc::
+install/freefoam-user-doc:: DEB_BUILDDIR_freefoam-user-doc := $(TOP_BUILDDIR)/doc/UserGuide
+install/freefoam-user-doc:: install-tutorials
+ +$(DEB_MAKE_INVOKE) $(DEB_MAKE_INSTALL_TARGET)
+
+install-tutorials: DEB_BUILDDIR_freefoam-user-doc := $(TOP_BUILDDIR)/tutorials
+install-tutorials: build/freefoam-user-doc
+ +$(DEB_MAKE_INVOKE) $(DEB_MAKE_INSTALL_TARGET)
install -d $(CURDIR)/debian/freefoam-user-doc/usr/share/doc/freefoam-user-doc/tutorials
- rm $(CURDIR)/debian/tmp/usr/share/doc/freefoam/tutorials/multiphase/interFoam/les/nozzleFlow2D/0/data/Ubulk
- rm $(CURDIR)/debian/tmp/usr/share/doc/freefoam/tutorials/multiphase/interFoam/les/nozzleFlow2D/0/data/ptrace
- rmdir $(CURDIR)/debian/tmp/usr/share/doc/freefoam/tutorials/multiphase/interFoam/les/nozzleFlow2D/0/data
+ rm -rf $(CURDIR)/debian/tmp/usr/share/doc/freefoam/tutorials/multiphase/interFoam/les/nozzleFlow2D/0/data
-install/freefoam-dev-doc::
- rm $(CURDIR)/debian/tmp/usr/share/doc/freefoam/API/jquery.js
+# Depends on build/freefoam-user-doc because the installation is started in
+# $(DEB_BUILDDIR)/doc, which also requires the UserGuide to be built.
+install/freefoam-dev-doc:: DEB_BUILDDIR_freefoam-dev-doc := $(TOP_BUILDDIR)/doc
+install/freefoam-dev-doc:: build/freefoam-user-doc
+ +$(DEB_MAKE_INVOKE) $(DEB_MAKE_INSTALL_TARGET)
+ rm -f $(CURDIR)/debian/tmp/usr/share/doc/freefoam/API/jquery.js
binary-install/libfreefoam1::
dh_pysupport -plibfreefoam1
@@ -111,3 +133,6 @@ binary-install/libfreefoam-dev::
binary-install/freefoam::
dh_pysupport -pfreefoam
+
+clean::
+ rm -f debian/freefoam-enable-docs.stamp
--- End Message ---
--- Begin Message ---
Source: freefoam
Source-Version: 0.1.0+dfsg-1.1
We believe that the bug you reported is fixed in the latest version of
freefoam, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Anibal Monsalve Salazar <[email protected]> (supplier of updated freefoam
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sat, 31 May 2014 03:03:08 +0100
Source: freefoam
Binary: libfreefoam1 libfreefoam-dev freefoam freefoam-user-doc freefoam-dev-doc
Architecture: source all mips
Version: 0.1.0+dfsg-1.1
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Anibal Monsalve Salazar <[email protected]>
Description:
freefoam - programs for Computational Fluid Dynamics (CFD)
freefoam-dev-doc - software for Computational Fluid Dynamics - developers
documentat
freefoam-user-doc - software for Computational Fluid Dynamics - user
documentation
libfreefoam-dev - libraries for Computational Fluid Dynamics (CFD) -
development fi
libfreefoam1 - libraries for Computational Fluid Dynamics (CFD)
Closes: 749909
Changes:
freefoam (0.1.0+dfsg-1.1) unstable; urgency=low
.
* Non-maintainer upload.
* Fix FTBFS on mips(el).
Add mips.diff.
Patch by Jurica Stanojkovic <[email protected]>.
Closes: #749909.
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