Your message dated Tue, 01 Dec 2015 21:23:32 +0000
with message-id <[email protected]>
and subject line Bug#762673: fixed in emboss 6.6.0+dfsg-3
has caused the Debian Bug report #762673,
regarding emboss: FTBFS on hurd-i386
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
762673: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=762673
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: emboss
Version: 6.6.0+dfsg-1
Severity: important
Tags: patch
User: [email protected]
Usertags: hurd
Hi,
Currently emboss fails to build from source due to usage of
PATH_MAX, which is not defined on GNU/Hurd. Only one file needs a
modification, see the attached path. This patch assumes getcwd(NULL,0)
works. Depending on for which systems this software is aimed at, a
configure.ac (.in here) check can be added. However, it seems that
upstream is not very active lately. This patch should work at least for
Debian supported OSes (libc4, libc5, glibc).
Thanks!
--- a/ajax/core/ajfile.c.orig 2013-07-15 23:25:29.000000000 +0200
+++ b/ajax/core/ajfile.c 2014-09-24 11:01:42.000000000 +0200
@@ -8574,9 +8574,9 @@
const AjPStr ajFileValueCwd(void)
{
- char cwd[PATH_MAX+1];
+ char *cwd = getcwd(NULL,0);
- if(!getcwd(cwd,PATH_MAX))
+ if(!cwd)
{
ajStrAssignClear(&fileCwd);
@@ -8589,6 +8589,7 @@
if(!ajStrSuffixC(fileCwd, SLASH_STRING))
ajStrAppendC(&fileCwd, SLASH_STRING);
+ free(cwd);
return fileCwd;
}
--- End Message ---
--- Begin Message ---
Source: emboss
Source-Version: 6.6.0+dfsg-3
We believe that the bug you reported is fixed in the latest version of
emboss, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated emboss package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Hash: SHA512
Format: 1.8
Date: Tue, 01 Dec 2015 16:03:42 +0100
Source: emboss
Binary: emboss emboss-data emboss-doc emboss-test emboss-lib jemboss
Architecture: source all amd64
Version: 6.6.0+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
emboss - European molecular biology open software suite
emboss-data - data files for the EMBOSS package
emboss-doc - documentation for EMBOSS
emboss-lib - EMBOSS Libraries
emboss-test - test files for the EMBOSS package
jemboss - graphical user interface to EMBOSS
Closes: 762673 806022
Changes:
emboss (6.6.0+dfsg-3) unstable; urgency=medium
.
* Make sure we will not delete documentation files from new upstream
version
* Enable build on hurd
Closes: #762673
* cme fix dpkg-control
* incorporate changes from biolinux (see below)
* Make sure data are really in th directory where they will be copied from
Closes: #806022
* Ignore false lintian positives about package-contains-timestamped-gzip
* Cleanup debian/copyright from not existing files and not DEP5 conform
issues
* d/watch: add version mangling
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