Your message dated Mon, 07 Dec 2015 16:35:15 +0000
with message-id <[email protected]>
and subject line Bug#807177: fixed in ampliconnoise 1.29-4
has caused the Debian Bug report #807177,
regarding ampliconnoise: Update dependencies for GSL 2.x
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
807177: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=807177
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: ampliconnoise
Version: 1.29-2
Severity: normal
Tags: patch
Dear Maintainer,
Please update your package for the ongoing gsl transition (#804246).
The attached patch updates the build dependencies to use libgsl-dev.
This change is required to not pull in GSL 1.x via libgsl0-dev.
Kind Regards,
Bas
diff -Nru ampliconnoise-1.29/debian/changelog ampliconnoise-1.29/debian/changelog
--- ampliconnoise-1.29/debian/changelog 2014-02-25 08:58:52.000000000 +0100
+++ ampliconnoise-1.29/debian/changelog 2015-11-22 00:31:32.000000000 +0100
@@ -1,3 +1,10 @@
+ampliconnoise (1.29-2.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * Update build dependencies for GSL 2, change libgsl0-dev to libgsl-dev.
+
+ -- Bas Couwenberg <[email protected]> Sun, 22 Nov 2015 00:31:23 +0100
+
ampliconnoise (1.29-2) unstable; urgency=low
[ Arthur Marble ]
diff -Nru ampliconnoise-1.29/debian/control ampliconnoise-1.29/debian/control
--- ampliconnoise-1.29/debian/control 2014-01-12 21:15:35.000000000 +0100
+++ ampliconnoise-1.29/debian/control 2015-11-22 00:29:12.000000000 +0100
@@ -5,7 +5,7 @@
Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
- libgsl0-dev,
+ libgsl-dev,
libopenmpi-dev
Standards-Version: 3.9.5
Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/ampliconnoise/trunk/
--- End Message ---
--- Begin Message ---
Source: ampliconnoise
Source-Version: 1.29-4
We believe that the bug you reported is fixed in the latest version of
ampliconnoise, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated ampliconnoise package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Mon, 07 Dec 2015 16:45:40 +0100
Source: ampliconnoise
Binary: ampliconnoise
Architecture: source amd64
Version: 1.29-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
ampliconnoise - removal of noise from 454 sequenced PCR amplicons
Closes: 715585 807177
Changes:
ampliconnoise (1.29-4) unstable; urgency=medium
.
[ Bas Couwenberg ]
* Drop explicit dependency on libgsl0ldbl, rely on ${shlibs:Depends}.
Closes: #807177
.
[ Andreas Tille ]
* Verified Mayhem bugs (bugs in Perseus and PerseusD remain)
Closes: #715585
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