Your message dated Sun, 10 Apr 2016 22:00:22 +0000
with message-id <[email protected]>
and subject line Bug#820028: fixed in python-biom-format 2.1.5+dfsg-2
has caused the Debian Bug report #820028,
regarding biom-format-tools, python-biom-format-doc: fails to upgrade from
'jessie' - trying to overwrite /usr/bin/biom,
/usr/share/doc-base/python-biom-format
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
820028: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=820028
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: biom-format-tools,python-biom-format-doc
Version: 2.1.5+dfsg-1
Severity: serious
User: [email protected]
Usertags: piuparts
Hi,
during a test with piuparts I noticed your package fails to upgrade from
'jessie'.
It installed fine in 'jessie', then the upgrade to 'stretch' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.
See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces
>From the attached log (scroll to the bottom...):
Selecting previously unselected package biom-format-tools.
Preparing to unpack .../biom-format-tools_2.1.5+dfsg-1_amd64.deb ...
Unpacking biom-format-tools (2.1.5+dfsg-1) ...
dpkg: error processing archive
/var/cache/apt/archives/biom-format-tools_2.1.5+dfsg-1_amd64.deb (--unpack):
trying to overwrite '/usr/bin/biom', which is also in package
python-biom-format 2.1+dfsg-1
Errors were encountered while processing:
/var/cache/apt/archives/biom-format-tools_2.1.5+dfsg-1_amd64.deb
Selecting previously unselected package python-biom-format-doc.
Preparing to unpack .../python-biom-format-doc_2.1.5+dfsg-1_all.deb ...
Unpacking python-biom-format-doc (2.1.5+dfsg-1) ...
dpkg: error processing archive
/var/cache/apt/archives/python-biom-format-doc_2.1.5+dfsg-1_all.deb (--unpack):
trying to overwrite '/usr/share/doc-base/python-biom-format', which is also
in package python-biom-format 2.1+dfsg-1
Errors were encountered while processing:
/var/cache/apt/archives/python-biom-format-doc_2.1.5+dfsg-1_all.deb
cheers,
Andreas
python-biom-format=2.1+dfsg-1_biom-format-tools=2.1.5+dfsg-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: python-biom-format
Source-Version: 2.1.5+dfsg-2
We believe that the bug you reported is fixed in the latest version of
python-biom-format, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated python-biom-format
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 10 Apr 2016 21:45:01 +0200
Source: python-biom-format
Binary: python-biom-format python3-biom-format python-biom-format-doc
biom-format-tools
Architecture: source amd64 all
Version: 2.1.5+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
biom-format-tools - command-line tools for BIOM format
python-biom-format - Biological Observation Matrix (BIOM) format (Python 2)
python-biom-format-doc - documentation for BIOM format
python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3)
Closes: 820028 820621
Changes:
python-biom-format (2.1.5+dfsg-2) unstable; urgency=medium
.
* Breaks+Replaces: python-biom-format (<= 2.1+dfsg-1)
Closes: #820028
* Enable building arch all packages separately
Closes: #820621
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--- End Message ---
