Your message dated Tue, 25 Oct 2016 16:58:00 +0000
with message-id <[email protected]>
and subject line Re: psi4: FTBFS with bindnow and PIE enabled
has caused the Debian Bug report #837685,
regarding boost1.61 needs PIE binNMU
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
837685: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=837685
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: psi4
Version: 1.0~rc-3
Severity: important
User: [email protected]
Usertags: pie-bindnow-20160906
Justification: FTBFS on amd64 with extra hardening
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64 with patched GCC and dpkg.
The rebuild tested if packages are ready for a transition
enabling PIE and bindnow for amd64.
For more information about the changes to sid's dpkg and GCC please
visit:
https://wiki.debian.org/Hardening/PIEByDefaultTransition
Relevant part (hopefully):
...
make[4]: Entering directory '/<<PKGBUILDDIR>>/builddir'
[100%] Linking CXX executable ../../../bin/psi4
cd "/<<PKGBUILDDIR>>/builddir/src/bin/psi4" && /usr/bin/cmake -E
cmake_link_script CMakeFiles/psi4.dir/link.txt --verbose=1
/usr/bin/c++ -DRESTRICT=__restrict__ -Xlinker -export-dynamic -fPIC
-std=c++11 -fopenmp -O2 -g -DNDEBUG
CMakeFiles/psi4_objlib.dir/export_psio.cc.o
CMakeFiles/psi4_objlib.dir/export_mints.cc.o
CMakeFiles/psi4_objlib.dir/psi_stop.cc.o
CMakeFiles/psi4_objlib.dir/export_functional.cc.o
CMakeFiles/psi4_objlib.dir/export_oeprop.cc.o
CMakeFiles/psi4_objlib.dir/export_plugins.cc.o
CMakeFiles/psi4_objlib.dir/export_blas_lapack.cc.o
CMakeFiles/psi4_objlib.dir/export_benchmarks.cc.o
CMakeFiles/psi4_objlib.dir/export_efp.cc.o
CMakeFiles/psi4_objlib.dir/export_cubeprop.cc.o
CMakeFiles/psi4_objlib.dir/clean.cc.o
CMakeFiles/psi4_objlib.dir/create_new_plugin.cc.o
CMakeFiles/psi4_objlib.dir/script.cc.o
CMakeFiles/psi4_objlib.dir/set_memory.cc.o
CMakeFiles/psi4_objlib.dir/read_options.cc.o
CMakeFiles/psi4_objlib.dir/export_libparallel.cc.o
CMakeFiles/versioned_code.dir/version.cc.o
CMakeFiles/versioned_code.dir/python.cc.o
CMakeFiles/versioned_code.dir/psi_start.cc.o
CMakeFiles/versioned_code.dir/psi4.cc.o -o ../../../bin/psi4 -rdynamic
-lutil -lm -lrt -ldl -lpython2.7 -Wl,--whole-archive
../../../lib/libadc.a ../../../lib/libccdensity.a
../../../lib/libccenergy.a ../../../lib/libcceom.a
../../../lib/libcchbar.a ../../../lib/libcclambda.a
../../../lib/libccresponse.a ../../../lib/libccsort.a
../../../lib/libcctransort.a ../../../lib/libcctriples.a
../../../lib/libdcft.a ../../../lib/libderiv_wrapper.a
../../../lib/libdetci.a ../../../lib/libdfmp2.a ../../../lib/libdfocc.a
../../../lib/libefp.a ../../../lib/libfindif.a ../../../lib/libfisapt.a
../../../lib/libfnocc.a ../../../lib/libmcscf.a
../../../lib/libmints_wrapper.a ../../../lib/libmrcc.a
../../../lib/libocc.a ../../../lib/liboptking.a
../../../lib/libpsimrcc.a ../../../lib/libsapt.a ../../../lib/libscf.a
../../../lib/libscfgrad.a ../../../lib/libthermo.a
../../../lib/libtransqt2.a ../../../lib/libdmrg.a
../../../lib/lib3index.a ../../../lib/libciomr.a ../../../lib/libdiis.a
../../../lib/libdisp.a ../../../lib/libdpd.a
../../../lib/libefp_solver.a ../../../lib/libfock.a
../../../lib/libfunctional.a -Wl,--whole-archive ../../../lib/libiwl.a
-Wl,--no-whole-archive ../../../lib/libmints.a ../../../lib/libmoinfo.a
../../../lib/liboptions.a ../../../lib/libparallel.a
../../../lib/libparallel2.a ../../../lib/libplugin.a
../../../lib/libsapt_solver.a ../../../lib/libscf_solver.a
../../../lib/libthce.a ../../../lib/libtrans.a
../../../lib/libpsi4util.a ../../../lib/libpsio.a
../../../lib/libPsiUtil.a ../../../lib/libqt.a
../../../lib/libcubeprop.a ../../../lib/libinterface_libefp.a
-Wl,--no-whole-archive -Wl,-Bstatic -lboost_filesystem -lboost_python
-lboost_regex -lboost_serialization -lboost_system -lboost_timer
-lboost_chrono -lboost_thread -lboost_date_time -lboost_atomic
-Wl,-Bdynamic -lpthread -llapack -lblas -lpython2.7 -lblas -llapack
-lint -lderiv -lutil -ldl -lrt -lm
/usr/lib/x86_64-linux-gnu/libchemps2.so -lchemps2
/usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5.so -lsz -lz -lpthread
-lm -lpython2.7 -ldl
-Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial/lib /usr/bin/ld:
/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/libboost_filesystem.a(operations.o):
relocation R_X86_64_32S against symbol
`_ZN5boost6detail15sp_counted_base7destroyEv' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld:
/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/libboost_filesystem.a(path.o):
relocation R_X86_64_32 against `.rodata.str1.8' can not be used when
making a shared object; recompile with -fPIC
...
/usr/bin/ld: final link failed: Nonrepresentable section on output
collect2: error: ld returned 1 exit status
src/bin/psi4/CMakeFiles/psi4.dir/build.make:201: recipe for target
'bin/psi4' failed
make[4]: *** [bin/psi4] Error 1
...
The full build log is available from:
https://people.debian.org/~rbalint/build-logs/pie-bindnow-20160906/psi4_1.0~rc-3_amd64.build.gz
Linking with boost dynamically would probably fix the problem.
Thanks,
Balint
--- End Message ---
--- Begin Message ---
On Tue, 13 Sep 2016 16:02:09 +0200 Balint Reczey
<[email protected]> wrote:
> Source: psi4
> Version: 1.0~rc-3
> Severity: important
> User: [email protected]
> Usertags: pie-bindnow-20160906
> Justification: FTBFS on amd64 with extra hardening
>
> Hi,
>
> During a rebuild of all packages in sid, your package failed to build on
> amd64 with patched GCC and dpkg.
>
> The rebuild tested if packages are ready for a transition
> enabling PIE and bindnow for amd64.
>
> For more information about the changes to sid's dpkg and GCC please
> visit:
> https://wiki.debian.org/Hardening/PIEByDefaultTransition
>
> Relevant part (hopefully):
> ...
> [...]
Rebuilt successfully with -fPIE
--- End Message ---
